Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1383 ATGGTTCTTCTGGTCAGCCTTGTGGGATTATGGTGTTTCACAGTTACTGCTTCAGCTTTCACTGCTTCTGGATGGACCCAAGGACATGCCACCTTTTATGGAGGTAGTGATGCCTCAGGAACAATGGGAGGAGCTTGTGGGTATGGAAATTTGTACTCGCAAGGGTATGGAACAAGAACTGCAGCTTTAAGTACAGCTTTATTCAATGATGGAGCTTCGTGTGGGGAATGCTACAAAATCATATGTGATTATAAGACAGACCCAAGATGGTGCATTAAAGGAAGATCCATAACTATAACTGCCACTAACTTCTGCCCACCAAATTTTGCTCTTCCAAATAACAATGGAGGTTGGTGCAACCCACCTCTTAAGCACTTTGACATGGCTGAACCAGCTTGGGAAAAGATTGGTATTTACAGAGGAGGCATCATCCCAGTCTTGTTCCAAAGGGTTCCATGTAAGAAGCATGGAGGTGTAAGGTTCACTGTGAATGGAAGAGATTACTTTGAGCTGGTTTTGATCAGTAATGTGGCAGGTGCTGGATCCATAACTTCTGTGTCCATCAAAGGCTCAAAGACTGGATGGATAGCTATGTCCAGAAATTGGGGAGCTAATTGGCAATCCAATTCATATTTGAATGGTCAATCTTTGTCATTTAAGGTCACAACCAGTGATGGAGAAATCAGAATGTTCCCAGATGTGGTTCCAGCTTCTTGGAGTTTTGGCCAGACATTCTCAAGCAATATCCAGTTCTAA 756 0.4325 MVLLVSLVGLWCFTVTASAFTASGWTQGHATFYGGSDASGTMGGACGYGNLYSQGYGTRTAALSTALFNDGASCGECYKIICDYKTDPRWCIKGRSITITATNFCPPNFALPNNNGGWCNPPLKHFDMAEPAWEKIGIYRGGIIPVLFQRVPCKKHGGVRFTVNGRDYFELVLISNVAGAGSITSVSIKGSKTGWIAMSRNWGANWQSNSYLNGQSLSFKVTTSDGEIRMFPDVVPASWSFGQTFSSNIQF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1383 251 Pfam Expansin C-terminal domain 159 236 IPR007117 -
Mibi05g1383 251 PRINTS Expansin/Lol pI family signature 64 82 IPR007118 GO:0005576
Mibi05g1383 251 PRINTS Expansin/Lol pI family signature 195 209 IPR007118 GO:0005576
Mibi05g1383 251 PRINTS Expansin/Lol pI family signature 42 60 IPR007118 GO:0005576
Mibi05g1383 251 PRINTS Expansin/Lol pI family signature 233 247 IPR007118 GO:0005576
Mibi05g1383 251 PRINTS Expansin/Lol pI family signature 24 39 IPR007118 GO:0005576
Mibi05g1383 251 PRINTS Expansin/Lol pI family signature 141 157 IPR007118 GO:0005576
Mibi05g1383 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 43 158 IPR007112 -
Mibi05g1383 251 Pfam Lytic transglycolase 60 147 IPR009009 -
Mibi05g1383 251 PRINTS Expansin signature 84 95 IPR002963 GO:0009664
Mibi05g1383 251 PRINTS Expansin signature 116 133 IPR002963 GO:0009664
Mibi05g1383 251 PRINTS Expansin signature 233 249 IPR002963 GO:0009664
Mibi05g1383 251 PRINTS Expansin signature 133 146 IPR002963 GO:0009664
Mibi05g1383 251 PRINTS Expansin signature 204 225 IPR002963 GO:0009664
Mibi05g1383 251 PRINTS Expansin signature 55 69 IPR002963 GO:0009664
Mibi05g1383 251 PRINTS Expansin signature 157 169 IPR002963 GO:0009664
Mibi05g1383 251 PRINTS Expansin signature 169 190 IPR002963 GO:0009664
Mibi05g1383 251 PRINTS Expansin signature 97 107 IPR002963 GO:0009664
Mibi05g1383 251 Gene3D - 158 251 IPR036749 -
Mibi05g1383 251 SUPERFAMILY Barwin-like endoglucanases 16 176 IPR036908 -
Mibi05g1383 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 168 247 IPR007117 -
Mibi05g1383 251 SUPERFAMILY PHL pollen allergen 155 247 IPR036749 -
Mibi05g1383 251 PANTHER EXPANSIN-A15 3 248 IPR002963 GO:0009664
Mibi05g1383 251 FunFam Expansin 14 154 - -
Mibi05g1383 251 FunFam Expansin 158 251 - -
Mibi05g1383 251 Gene3D - 12 154 IPR036908 -
Mibi05g1383 251 SMART dpbb_1 60 148 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1383 Mibi-ChrMibi05 16435108 16436049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1383 3 251 Expansin Gene Family AT4G01630 66.000 2.05e-122 347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1383 05 16435108 16436049 Mibi05g1383 05 16435108 16436049 ECH