Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1371 ATGGGAGATAAATCGGAAAACGTGGTTTACCTTCACGGTGACCTTGATTTGAGAATAATTGAGGCTCGATGTTTGCCAAACATGGATTTGTTATCAGAACGTATGAGGCAATGTTTTTCCCTCTTCAATTCCTGCACATCTCCAGTTTCCGGTGACCGGAGACACCATCATCACGGAAAAATCATCACCAGCGATCCTTACGTCAAAGTCTGCCTTGCAAAAGCAACGGTGGCTCGAACACGTGTCATCTCCAACACACAGCATCCAATTTGGAATGAACATTTCAAAATCCCTCTTGCTCATCCTGTATCGCGCGTCGAATTCTACGTCAAGGACAATGACGTTTTCGGCGCAGATCTCGTCGGAGTCGCTACCGTTTCTGCCGATAGAATCTTATCAGGTGAATTCATCAGCGGTTGGTTTCCTGTTCTTAGTTCTTACGGTAAACCGCCCAAACCTGATTGTGCGATTCGTCTCGAGATGAAATTCACGAAATGTGAGGATAGTCCGTTGTATAGCTATGGAATTTCTTCCAATTCTGGCCGTTTTAATGTTCGGGATTCTTATTTTCCGGTTCGTCATGGAGGATCGGTGACGTTATATCAGGACGCACATGTTCCAGAATCGATGTTGCCGAAAATTGAATTGGAGAATGGCGTTTTCTTCCAGCAAGGAAAATGTTGGGAAGATATATGTCATGCGATTTTGGAAGCGCATCATTTGGTTTACATTGTAGGCTGGTCGATCTTCCATAAGGTGAAATTGGTGAGGGAGCCGACGAAGCCTTTACCTAATGGTGGCAATTTGAGTTTGGGTGATTTGCTGAAGTACAAGTCTGGAGAAGGTGCGCGAGTTTTATTATTGGTTTGGGATGATAAGACTTCACACAACAAATTTTTCTTTAAAACGGATGGTGTGATGCGTACTCACGATGAAGAAACCCGAAAATTTTTCAAACACTCTTCGGTTATATGTGTGCTGTCACCTCGATATGCTAGCAATAAATTTCAGGTTGTTGGAACCCTATTCACTCATCATCAGAAATGTGTGATTGTGGATACTCAAGCACAAGGCAATAATCGCAAAATAACTGCATTTATAGGTGGTCTTGACCTGTGTGATGGCCGGTATGATACACCTGAGCATCGAATTTTCCGAGATCTTGGCACTATTTATAAGGATGATTATCACAACCCTACATTTCCTGTTGGAATGAAGGGTCCAAGGCAGCCATGGCATGACTTACATTGCAAAATTGAAGGGCCTGCCGCATATGATATACTTACTAATTTTGAGCAACGCTGGAGAAAAGCCACCAAGTGGCGTGAGTTGGGTCAAAAATTTAAAAAAGTATCTCGTTGGCAAGATGATTCTTTGTTAAAGCTAGAACGCATCTCTTGGATTCTCAGTCCTTCTGCATCTATTCCAAATGATGATCCAGAACTATGGGTTTCAAAGGAAGAAGATCCAGAAAACTGGCACGTTCAGGTTTTTCGATCAATAGATTCAGGCTCATTGAAAGGATTTCCCAAGGATGTGTATGAAGCTGAGGCTCAGAACCTTGTTTGTGCAAAAAATTTGGTCATCGACAAAAGTATACAAGCAGCGTATATACAAGCTATCAGATCTGCTCAACATTTTATTTACATCGAGAATCAATATTTTGTTGGATCATCCTTTGCATGGCCATCTTACAAAGAAGCAGGTGCTGACAATTTAATTCCTATGGAGTTGGCATTGAAGATTGTCAGCAAAATAAGAGCCAATGAAAGATTTGCTGTTTATGTTGTTATACCAATGTGGCCTGAGGGCATCCCTTCTTCTTCCGCAGTTCAGGAGATTCTTTTTTGGCAGGCACAAACTATGCAAATGATGTATGAAATGATAGCGCAAGAGTTGAAATCCATGCACATCAACAACAAACGCCCAAGAGATTATCTCAATTTCTACAGTCTGGGAAATCGGGATAACTGTCCAACTGAAGTTTTAAGTTCAAGTAATTCAACTCCAAATAACTCAGATTTAGTTTCAGCTTCACAAAAGTCCCAACGATTCATGATTTACGTGCACTCCAAGGGTATGATTGTGGATGATGAGTATGTCTTGCTCGGTTCGGCCAATATCAATCAACGATCGTTGGCCGGTTCAAGAGATACAGAGATAGCTATGGGTGCATATCAATCCCATCACACATGGGAAAAGAAAGGGGCACATCCTCACGGCCAGGTTTACGGGTATAGAATGTCTTTATGGGCAGAACATCTAGGGACGGTTGATGATTGCTTCAAGGAGCCACAAAGTTTGGATTGTGTGAAGAAAGTGAATATGATAGCGAGTGAGAACTGGAAGAAGTACACAGCTAACGAGTGCAGTCCATTACAGGGGCACCTTATGAAATATCCAATATATGTAGATGTGAATGGCAAGGTACATCCCATACCTGGACATGAAAATTTTCCAGATGTGGGTGGCAAAGTACTTGGCAGCCGAACTACCCTTCCTGATGTCCTCACTACATAA 2520 0.4218 MGDKSENVVYLHGDLDLRIIEARCLPNMDLLSERMRQCFSLFNSCTSPVSGDRRHHHHGKIITSDPYVKVCLAKATVARTRVISNTQHPIWNEHFKIPLAHPVSRVEFYVKDNDVFGADLVGVATVSADRILSGEFISGWFPVLSSYGKPPKPDCAIRLEMKFTKCEDSPLYSYGISSNSGRFNVRDSYFPVRHGGSVTLYQDAHVPESMLPKIELENGVFFQQGKCWEDICHAILEAHHLVYIVGWSIFHKVKLVREPTKPLPNGGNLSLGDLLKYKSGEGARVLLLVWDDKTSHNKFFFKTDGVMRTHDEETRKFFKHSSVICVLSPRYASNKFQVVGTLFTHHQKCVIVDTQAQGNNRKITAFIGGLDLCDGRYDTPEHRIFRDLGTIYKDDYHNPTFPVGMKGPRQPWHDLHCKIEGPAAYDILTNFEQRWRKATKWRELGQKFKKVSRWQDDSLLKLERISWILSPSASIPNDDPELWVSKEEDPENWHVQVFRSIDSGSLKGFPKDVYEAEAQNLVCAKNLVIDKSIQAAYIQAIRSAQHFIYIENQYFVGSSFAWPSYKEAGADNLIPMELALKIVSKIRANERFAVYVVIPMWPEGIPSSSAVQEILFWQAQTMQMMYEMIAQELKSMHINNKRPRDYLNFYSLGNRDNCPTEVLSSSNSTPNNSDLVSASQKSQRFMIYVHSKGMIVDDEYVLLGSANINQRSLAGSRDTEIAMGAYQSHHTWEKKGAHPHGQVYGYRMSLWAEHLGTVDDCFKEPQSLDCVKKVNMIASENWKKYTANECSPLQGHLMKYPIYVDVNGKVHPIPGHENFPDVGGKVLGSRTTLPDVLTT 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1371 839 SMART C2_3c 14 140 IPR000008 -
Mibi05g1371 839 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 341 376 IPR001736 GO:0003824
Mibi05g1371 839 FunFam Phospholipase D delta 218 457 - -
Mibi05g1371 839 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 685 712 IPR001736 GO:0003824
Mibi05g1371 839 PIRSF PLD_plant 1 839 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mibi05g1371 839 SUPERFAMILY Phospholipase D/nuclease 184 445 - -
Mibi05g1371 839 ProSiteProfiles C2 domain profile. 1 141 IPR000008 -
Mibi05g1371 839 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 11 165 IPR035892 -
Mibi05g1371 839 Pfam C2 domain 13 143 IPR000008 -
Mibi05g1371 839 CDD C2_plant_PLD 8 164 - -
Mibi05g1371 839 Pfam Phospholipase D Active site motif 342 376 IPR001736 GO:0003824
Mibi05g1371 839 Pfam Phospholipase D Active site motif 686 712 IPR001736 GO:0003824
Mibi05g1371 839 SMART pld_4 685 712 IPR001736 GO:0003824
Mibi05g1371 839 SMART pld_4 341 376 IPR001736 GO:0003824
Mibi05g1371 839 SUPERFAMILY Phospholipase D/nuclease 530 771 - -
Mibi05g1371 839 Gene3D C2 domain 12 170 IPR035892 -
Mibi05g1371 839 Pfam Phospholipase D C terminal 759 829 IPR024632 -
Mibi05g1371 839 Gene3D Endonuclease Chain A 220 461 - -
Mibi05g1371 839 Gene3D Endonuclease Chain A 506 733 - -
Mibi05g1371 839 PANTHER PHOSPHOLIPASE D 5 830 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1371 Mibi-ChrMibi05 16342678 16348272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1371 1 669 Phospholipase D Gene Family (Wang group) AT4G35790 64.748 0.0 936
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1371 05 16342678 16348272 Mibi05g1371 05 16342678 16348272 ECH