Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1348 ATGACACTGGTGAGAGCGTCGCTGTCAGAAGAGTGGCCAGCAACGAAGCTAGCATCGGGGCCACTACCGGAAAACAGCAAACATTGCGCACTTGTTATCGCGGTTATTTATTGAGGCTTAATATCTCCGTCTTTCGGCGTTTCAAGCCCTAGTCACCCCAACTTCTCTTGTCCCCAACCTGTTTCTCTCTCCTTTCACTATCCTATCCTCCAATTCTCCATCCCGGTACTTTTCGACATGAAAGGAAAATCGTCGAAGACTGAATCCAGGAAAGCTGATACCAAGCTTGCTGTGAATAAGAAGGGCGGCGCCGCCACAAAGGCTGGCAGGAAAACTAGCAAGGGAAAGGCGGCGAAAGACCCTAACAAGCCAAAGAGACCAGCCAGTGCCTTCTTTGTGTTCATGGAGGAGTTTAGGAAGCAGTTTAACAAGGAAAATCCTGACAACAAAGCAGTGTCTGCTGTTGGAAAAGCTGCTGGGGCAAAATGGAAGTCCATGTCTGATGCTGAGAAAGCACCCTACGTAGCTAAAGCGGAGAAACGAAAGGTTGACTATGAGAAGAATATGAAAGCCTATAACAAGAAACAGGCGGAAGGTCCAACTGCTGCAGATGAAGAGGAATCTGATAAATCAGTTTCTGAGGTGAATGATGAAGACGATGGAGATGATGAGGGCAGTGACGAGGAGGAAGATGATGAGTAG 702 0.4786 MTLVRASLSEEWPATKLASGPLPENSKHCALVIAVIYXGLISPSFGVSSPSHPNFSCPQPVSLSFHYPILQFSIPVLFDMKGKSSKTESRKADTKLAVNKKGGAATKAGRKTSKGKAAKDPNKPKRPASAFFVFMEEFRKQFNKENPDNKAVSAVGKAAGAKWKSMSDAEKAPYVAKAEKRKVDYEKNMKAYNKKQAEGPTAADEEESDKSVSEVNDEDDGDDEGSDEEEDDE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1348 233 MobiDBLite consensus disorder prediction 210 233 - -
Mibi05g1348 233 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 124 193 IPR009071 -
Mibi05g1348 233 Coils Coil 175 195 - -
Mibi05g1348 233 Gene3D High mobility group box domain 108 209 IPR036910 -
Mibi05g1348 233 SMART hmgende2 123 194 IPR009071 -
Mibi05g1348 233 SUPERFAMILY HMG-box 111 201 IPR036910 -
Mibi05g1348 233 MobiDBLite consensus disorder prediction 173 209 - -
Mibi05g1348 233 CDD HMGB-UBF_HMG-box 124 190 - -
Mibi05g1348 233 MobiDBLite consensus disorder prediction 99 126 - -
Mibi05g1348 233 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 80 228 IPR031061 -
Mibi05g1348 233 Pfam HMG (high mobility group) box 124 193 IPR009071 -
Mibi05g1348 233 MobiDBLite consensus disorder prediction 167 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1348 Mibi-ChrMibi05 16172570 16176862 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mibi05g1348 HMG_box 1.9e-23 CL0114