Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1347 ATGAAAGGACCAAAGGCGGAATCCAAGAGAGCTGATGCCAAGCTTGCTGTGAATAAGAAGGGCGCCGCCGCCACCAAGGCTGGCAGAAAACCTAGCAAGGGAAAGGCGGCGAAGGATCCTAACAAACCGAAGAGACCGGCCAGTGCCTTCTTTGTTTTCATGGAGGAGTTTAGGAAGCAGTTTAACAAGGAAAATCCTAACAACAAAGCTGTATCTGCTGTTGGCAAAGCTGCTGGTGCTAAATGGAAGTCCATGTCTGATGCTGAGAAAGCACCCTATGTGGCCAAAGCAGAGAAACGTAAGGCTGACTATGAGAAGGATATGAAGGCCTATAACAAGAAACAGGCGGAAGGTCCCGATTGTGCAGACGAAGAATCTGAGAAGTCAATGTCTGAGGTCAATGATGCTGATGGAGGAGATGAAGATGACAGCGATGAGGAGGAAGATGACGAGTAG 456 0.4868 MKGPKAESKRADAKLAVNKKGAAATKAGRKPSKGKAAKDPNKPKRPASAFFVFMEEFRKQFNKENPNNKAVSAVGKAAGAKWKSMSDAEKAPYVAKAEKRKADYEKDMKAYNKKQAEGPDCADEESEKSMSEVNDADGGDEDDSDEEEDDE 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1347 151 Pfam HMG (high mobility group) box 43 112 IPR009071 -
Mibi05g1347 151 MobiDBLite consensus disorder prediction 92 135 - -
Mibi05g1347 151 Coils Coil 94 114 - -
Mibi05g1347 151 MobiDBLite consensus disorder prediction 62 151 - -
Mibi05g1347 151 SMART hmgende2 42 113 IPR009071 -
Mibi05g1347 151 CDD HMGB-UBF_HMG-box 43 109 - -
Mibi05g1347 151 Gene3D High mobility group box domain 26 135 IPR036910 -
Mibi05g1347 151 MobiDBLite consensus disorder prediction 1 47 - -
Mibi05g1347 151 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 2 149 IPR031061 -
Mibi05g1347 151 SUPERFAMILY HMG-box 31 119 IPR036910 -
Mibi05g1347 151 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 43 112 IPR009071 -
Mibi05g1347 151 MobiDBLite consensus disorder prediction 1 16 - -
Mibi05g1347 151 MobiDBLite consensus disorder prediction 136 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1347 Mibi-ChrMibi05 16168646 16169903 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mibi05g1347 HMG_box 6e-24 CL0114