Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1343 ATGGCTGCGGGAATGGATTTTTCTCCCCCTTTTACCATATTAGAAGGCCCTCAAGGTAGTTACAACAAGGATAATGTATTAATCATGGAGGATGAGAAATCTATAGATTTGAACAAAGTGAAACAAACAACAACTGGTAAACCCCCACGGAATCTCTCCCTCTTGAGACATAGCATCAGCTCTACAAAGTTGCAAGCTGCCGCAGATTTGAGTTCTGATTCGGAGGTTGTTGGGAGTAAATCGTCTTCTGACGAGAAGGCAGAATTTCAACCCATATATCGGTCAGGAAGTTGCGCTGAAATTGGACCTAAACAGTACATGGAAGATGAACACATCTGTGTTGATAATCTTATTGAGCAACTAGGTTCAGTTTCAGAAATTCCTTCTCATGGAGCTTTCTATGGGGTGTTTGATGGTCATGGTGGGACTGATGCAGCTACATATATAAGAAATAACATCCTCAAATTTATAGTTGAGGATCCTCATTTTCCAACTTACCTAGAGAAGGCAATTAAAAGTGCCTTTCTGAAAGCTGATTATGCATTTGCAGATGTTAGTTCGCTTGACATCTCTTCTGGCACCACTGCTTTAACTGCGCTTGTATTTGGAAGGAACCTGATAGTTGCGAATGCCGGGGATTGCCGAGCCGTGCTAGGGAGGCGAGGGAGAGCAGTAGAGATGTCAAAAGACCACAAACCAAATATCAGCTCAGAAAGGATAAGGATTGAGAAACTTGGTGGAGTGGTATATGATGGATACCTGAATGGTCAGCTCTCTGTTGCACGTGCCTTAGGAGACTGGCACATGAAGGGTCCCAAGGGTTCTGCCTGCCCTTTAAGTGCCGAGCCAGAGTTGCAGGAAGTACTCTTGACAGAGGATGACGAGTTCTTGATTATGGGATGTGATGGCCTATGGGACGTTATGAGCAATCAATGTGCTGTGACCATGGCAAGGAGAGAGTTGATGCTACATAATGATCCAGAAAGGTGTTCAAGAGAGCTTGTCAGAGAAGCTCTTAAGCGCAACACTTGTGATAATTTAACTGTTATAGTGGTGTGTTTCTCCCCAGATCCTCCTCCTCGGATTGAACCACCTCCTTCTCGAGTTAGGAGGAGTATTTCAGCGGAAGGGCTCAATTTACTTAAGGGTGTACTAGATTGTAATCCATGA 1170 0.441 MAAGMDFSPPFTILEGPQGSYNKDNVLIMEDEKSIDLNKVKQTTTGKPPRNLSLLRHSISSTKLQAAADLSSDSEVVGSKSSSDEKAEFQPIYRSGSCAEIGPKQYMEDEHICVDNLIEQLGSVSEIPSHGAFYGVFDGHGGTDAATYIRNNILKFIVEDPHFPTYLEKAIKSAFLKADYAFADVSSLDISSGTTALTALVFGRNLIVANAGDCRAVLGRRGRAVEMSKDHKPNISSERIRIEKLGGVVYDGYLNGQLSVARALGDWHMKGPKGSACPLSAEPELQEVLLTEDDEFLIMGCDGLWDVMSNQCAVTMARRELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSPDPPPRIEPPPSRVRRSISAEGLNLLKGVLDCNP 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1343 389 SMART PP2C_SIG_2 109 354 IPR001932 -
Mibi05g1343 389 SUPERFAMILY PP2C-like 89 355 IPR036457 -
Mibi05g1343 389 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Mibi05g1343 389 CDD PP2Cc 93 354 IPR001932 -
Mibi05g1343 389 PANTHER PROTEIN PHOSPHATASE 2C 79 352 IPR015655 GO:0004722|GO:0006470
Mibi05g1343 389 FunFam Probable protein phosphatase 2C 22 79 357 - -
Mibi05g1343 389 MobiDBLite consensus disorder prediction 1 20 - -
Mibi05g1343 389 Gene3D - 73 357 IPR036457 -
Mibi05g1343 389 Pfam Protein phosphatase 2C 96 346 IPR001932 -
Mibi05g1343 389 SMART PP2C_4 84 352 IPR001932 -
Mibi05g1343 389 ProSiteProfiles PPM-type phosphatase domain profile. 94 354 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1343 Mibi-ChrMibi05 16118758 16120366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1343 5 389 PP2C-type Phosphatase Gene Family AT2G33700 71.835 0.0 561