Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1331 ATGGCATACCACCAGATCCAGGGTCATACGCCCACTCATGGATCCAATTCAAGTTCTGGATTTCAACCAGTAAATTCCCCTTTTGGTGATACCACTTTTACTAAAGTGTTTGTTGGAGGATTGGCTTGGGAGACTCAGAGTGAAACCATGCGCCGATACTTTGAGCAGTTTGGTGACATTCTTGAAGCTGTTGTAATCACTGATAGGAATACAGGCCGATCCAAAGGATATGGCTTTGTGACTTTCCGGGATCCTGAGGCTGCTAGAAGAGCCTGTGCTGATCCAACTCCTATCATTGATGGAAGGAGGGCCAATTGTAATTTGGCTTCACTTGGACGACCGTGGCCTCCTCTTCCATATGGACGAGTAAGGCCAGCTCCTGCTTATGTTGGAAATGTGCAACCAGCCCGAGGTGCCTATGTTGGAGGTTTTGGCTATCAGCAACCGCCTTCTTACAGCTATCAACAAGGATTGGTTTATCCTCATTATGGGTATACAGCATATGGACCTGAATATGCATATCCACAGGGTTTGTACAACCCATATATGGGCCAGCAGTATGTTCAGATATATGGAGTGCCCAGTGCAGTGAATAATGCTATTTATCCTTATGGGCAGCTAGGTCAGGCCATTCCCAGTAGTCATGGCTATACAGGAATGCAGGGCTATGCAGTAACTGGTCATCACATTGTACCTTATGGTGGCACCAATGTTAATGCCCTGACTACTTCACCTATGCCTACCATTCAAGTACCATATCCCAGTGGAATTGCTGCACCAATTCCAGGACAACCCCAATTTATTGTCCCTGCGCCTTCTCAGTTTATGCAAGGAACCGGTCCTGACCAAGCAGCTGGGTGA 861 0.4704 MAYHQIQGHTPTHGSNSSSGFQPVNSPFGDTTFTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDRNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPWPPLPYGRVRPAPAYVGNVQPARGAYVGGFGYQQPPSYSYQQGLVYPHYGYTAYGPEYAYPQGLYNPYMGQQYVQIYGVPSAVNNAIYPYGQLGQAIPSSHGYTGMQGYAVTGHHIVPYGGTNVNALTTSPMPTIQVPYPSGIAAPIPGQPQFIVPAPSQFMQGTGPDQAAG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1331 286 CDD RRM_RBM24_RBM38_like 34 109 - -
Mibi05g1331 286 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 111 IPR000504 GO:0003723
Mibi05g1331 286 SUPERFAMILY RNA-binding domain, RBD 9 121 IPR035979 GO:0003676
Mibi05g1331 286 SMART rrm1_1 35 107 IPR000504 GO:0003723
Mibi05g1331 286 MobiDBLite consensus disorder prediction 1 25 - -
Mibi05g1331 286 PANTHER BOULE-RELATED 15 249 IPR037366 -
Mibi05g1331 286 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 28 114 - -
Mibi05g1331 286 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 92 IPR000504 GO:0003723
Mibi05g1331 286 MobiDBLite consensus disorder prediction 8 25 - -
Mibi05g1331 286 Gene3D - 3 116 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1331 Mibi-ChrMibi05 16002462 16005200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1331 24 110 C2H2 Transcription Factor Family AT2G19380 40.230 1.62e-15 74.7