Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1306 ATGCCCCGAAACTCAAACACCTCTTCTTTTGAACACCTCGTCAGCGCGCCAAGTAATCTTTTAGCTCAAGTCGAAGCTTTAACCATGTCTCTCGCTCTCATTGAAGCGTGTAAGAAAAGAAAAAGATTGCCCAAAGTCTTCAGGTTTCACTCTTTCGCTGACCCTGGTTGCCCCATTAATCCAATCGGACCTTTTAGAGACAATGTTCGTCTCTTTCTTCAAGAATGTGCTGAGCTTGAAGATTCCCAGATTCAGGGTATGCCTCTATGGGCTACCTTTCTTATTCACGAGAAATCGAACTATATGACCCCTCTTTACACCATTGAAGAGAATGTCTATCACTCTTCACACCCCTTCTGCGATCATTGCCGATGTGCAGGCTGGAGCGGACATTTTGTATCGAAAAGAAGGTACCATTTCATAATCACCGCCGATAATAAACCTTTGACTGAAGATTTTCTCGATAATCAGAATCATCTATTGCACGGAATGGTTCACTGTAATGGGTATGGTCATTTGCTCTGTATCAATGGCATTGAAGGGGGTTCTAAATTTTTCAGTGGCAGAGAAATCATGGATCTCTGGGACAGGATCTGTACAATTCTTCGAACAAGGAAAATTGCAGTTGAAGATACTTCAAAGAAACGTTTAATGGATCTTCGCCTACTTCATGGAGTAGCTTATGGCCATTCTTGGTTTGGTAGGTGGGGTTACAGATTTTGCCGTGGAAGCTTTGGGGTAACAGAACACAATTATAATGCTGCAATCCAAATTCTTAGTTCGTTAGAGCTTGATGAGGTCGTTCAGTGTTTTGGTAATACAAAGTGCTATATAGGAATCAAACAAATAATTCGCCATTATAGAGACATGAGTGAAACTCAGTTGATTACAATCAAGGATATTTTCAGGTTTATGCTTACTGTCAAGTCTCGAACTATTCCTCCACCAAAGAGAGTATTTGTCAATATCTCTCTTGCTCCTCCTTCAAAATTCTGTTCAAAAAACTCTACGAGATTTTTAATGTCAAATAAACAAAGCCCGTTAAAGGATAAATCAGTGAGGTACAAGAAGTTCAGTTCTGCTGTGGCTAATATGGATAGTAGGTGGCCTTCAAGGCGATTAGAATATGCAGCCCATGTGATAGTAGATGCTTTGAAAGAAAACAAAGCAAATAGTTCAGGTTCTGGTGGGATGACTAGGCAAGATGTAAGGGATGCAGCTAGGCTCCACATTGGTGACACAGGCTTGCTGGATTATGTGCTGAAATCACTGAATAACATGATTGTTGGAAACTACGTTGTTCGTCGAATGGTCAACCCCATGACTCGAATCCTAGAGTATAACATTCATGAGCTGGGAAATGTGTCTGAATCCCCTCAAATATGTTCTGGGCTAAAGGGTTTTGAACGTTTTGAGATTCCAGCAAAGTCAGAACTAGTGCCAGGAACTGATGTTTACAGTGGTGTAGCTTATCTGTACAATAATGTTCTGATGGGCTACCCAGATTCAGAACAAGTAGACTTGGCGGTTCAAACAATTCTAGACAGTAGGCATTTTGTGAAGGAATGGACATTAACTGATGAAGTAGAGCAAGTTTTGACATTCATATGCCGCTTGATCCCCAACTTTGCTGATGATAAGCCAGAGTTGATGAATAATAAGGAAGTATGCCCAGGTGAGATAGTGATGGTTCCACTGCATGCAACAGTTGGAGACTTGAAGCAGGCAGCTGAGACTGCTCTAAGGGATACTTATTGTATTGCAGGGGGAATCATGGTGATAGAGATCACTGAGTTGGTGGGAATAAGTGATGAGGAAGTGCTTTTTGGAGTAGTGGAGTCTGGTGCGAACCTGCATGTGAGGGGAATTGGTATAGATTTGATAACTCCATTGAAGTATCAGGGAGGATCAGACAATTGGAAGGTGAGATGTGAGTGTGGAGCTCAAGATGATGATGGTGAGAGAATGGTGGCATGTGATGTTTGTGAGGTGTGGCAGCACACAAGGTGCTGTGGGATTGATGACTCAGAGACTGTACCTCCATTGTTTGTGTGCTCTGGGTGTTGTGATTCACTTGTGCCTCCAAGAATTGATTCTGGCTTTATTAGCAACAGTAGCATGGACTGTGCTGATGATTTTCTAATTTCCATGGAGCCTAATAACCTTCTGGAATATGGTTGTGGGTACTGA 2190 0.4205 MPRNSNTSSFEHLVSAPSNLLAQVEALTMSLALIEACKKRKRLPKVFRFHSFADPGCPINPIGPFRDNVRLFLQECAELEDSQIQGMPLWATFLIHEKSNYMTPLYTIEENVYHSSHPFCDHCRCAGWSGHFVSKRRYHFIITADNKPLTEDFLDNQNHLLHGMVHCNGYGHLLCINGIEGGSKFFSGREIMDLWDRICTILRTRKIAVEDTSKKRLMDLRLLHGVAYGHSWFGRWGYRFCRGSFGVTEHNYNAAIQILSSLELDEVVQCFGNTKCYIGIKQIIRHYRDMSETQLITIKDIFRFMLTVKSRTIPPPKRVFVNISLAPPSKFCSKNSTRFLMSNKQSPLKDKSVRYKKFSSAVANMDSRWPSRRLEYAAHVIVDALKENKANSSGSGGMTRQDVRDAARLHIGDTGLLDYVLKSLNNMIVGNYVVRRMVNPMTRILEYNIHELGNVSESPQICSGLKGFERFEIPAKSELVPGTDVYSGVAYLYNNVLMGYPDSEQVDLAVQTILDSRHFVKEWTLTDEVEQVLTFICRLIPNFADDKPELMNNKEVCPGEIVMVPLHATVGDLKQAAETALRDTYCIAGGIMVIEITELVGISDEEVLFGVVESGANLHVRGIGIDLITPLKYQGGSDNWKVRCECGAQDDDGERMVACDVCEVWQHTRCCGIDDSETVPPLFVCSGCCDSLVPPRIDSGFISNSSMDCADDFLISMEPNNLLEYGCGY 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1306 729 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 631 692 IPR013083 -
Mibi05g1306 729 SMART PHD_3 643 689 IPR001965 -
Mibi05g1306 729 ProSitePatterns Zinc finger PHD-type signature. 644 688 IPR019786 -
Mibi05g1306 729 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 37 695 - -
Mibi05g1306 729 CDD PHD_MMD1_like 644 688 - -
Mibi05g1306 729 SUPERFAMILY FYVE/PHD zinc finger 636 694 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1306 Mibi-ChrMibi05 15705785 15708446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1306 38 694 PHD Transcription Factor Family AT5G22260 32.584 1.08e-113 356