Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1302 ATGAAAGCAAACTTTGATCTTGAAGTGGAGGCTTCCGCAGAAAGTGAATTTGAAGACAGCAGCCAAATTGCTTCCAATATATCCACTCAAGAAACTATTGCTCGTCCTTTTAGTGATCAAAACCTGCCAAACTCTTCCACCTCAGGAAATCCAACTGAGATAGTTGATGGGAATTCAAATTCTATTTTTCATGACCTGAATCTCAACCCAGTTAATAGTAAAAACAACTATAAAAAGAAGTTAGCAGGGTCACGACTCTCAGTCTCAAGCACTAGTGGGATTAGCAATGAATCTGCCTCTCCAACTACAGAAGTGACCCTTGCCCGAGTTTTCACCTGCAATTACTGTCAACGCAAGTTTGTCAGCTCGCAGGCTCTTGGGGGGCACCAAAATGCACACAAGAGAGAAAGAGCATTGGCAAAGAAGCATGCCATGAGGATGGGTATTTTCTCTCAGAGCCAGAGGTATCCATGTCTAGCACCTCTCCCTCTTAATGGTTCTTCCAGAGCATTGGCCATAAAAGTACACGCTTCGCAGCACTATAACTTTTCACCAGCAATGAAGGTTCAAGAGATGAAAAACAATGCAGGAATTGGGATAGGATGTTATACTCAGCCAATTTTCTTGGGGAATAATCAACATGGACTTGTTTGGCCTGGTTGTTTCCGTCAGATTCCAGAAACAAAAGAATTTGACATTACAAAAAAAGGTGATGATCATAAGAATTCTCAGCTGACTGAAAATTCTGATTTGAATTCTAGGGAGGGGAATCCACCAGTAGACATAGAGAAGCCTATCCCAGATTTGACATTAAAACTTTGA 822 0.4148 MKANFDLEVEASAESEFEDSSQIASNISTQETIARPFSDQNLPNSSTSGNPTEIVDGNSNSIFHDLNLNPVNSKNNYKKKLAGSRLSVSSTSGISNESASPTTEVTLARVFTCNYCQRKFVSSQALGGHQNAHKRERALAKKHAMRMGIFSQSQRYPCLAPLPLNGSSRALAIKVHASQHYNFSPAMKVQEMKNNAGIGIGCYTQPIFLGNNQHGLVWPGCFRQIPETKEFDITKKGDDHKNSQLTENSDLNSREGNPPVDIEKPIPDLTLKL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1302 273 ProSitePatterns Zinc finger C2H2 type domain signature. 113 133 IPR013087 -
Mibi05g1302 273 Gene3D Classic Zinc Finger 91 158 - -
Mibi05g1302 273 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 14 195 IPR044246 GO:0009788
Mibi05g1302 273 SUPERFAMILY beta-beta-alpha zinc fingers 109 138 IPR036236 -
Mibi05g1302 273 Pfam C2H2-type zinc finger 110 135 - -
Mibi05g1302 273 MobiDBLite consensus disorder prediction 233 273 - -
Mibi05g1302 273 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 138 IPR013087 -
Mibi05g1302 273 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1302 Mibi-ChrMibi05 15673539 15674360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1302 109 273 C2H2 Transcription Factor Family AT1G66140 37.766 7.64e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi05g1302 zf-C2H2_6 1.4e-05 CL0361