Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1300 ATGCCCTTACAAGGGATTGCCGCCATAGAACCCAGTTCCACCACATGTGCTTCTCCTGATCTTTCCCTTCACATAAGCCTTCCTTCTTCTTCTTCTTTGGAAACTCATCATCAAGCTCCTACTGATCTCTCTCTACCATCCAATTTCTTCACTGACCAACCTCCTCCTCATAATTACAATCCCAGCACACCCTCTACTCACTTCAGCCACCAGATAATAATGAACTCGCCGTCGTCAGAAGTGGGTGGCCTGAGACCGATCAAGGGGATTCCAGTGTATCACAACCACCAACGTTGCTTCCCTTTCTTGCCCTTTGATCATCATCCCACCACCACACCCAAAGATCTCCATCATCATCATCAACAACACAAGATGTGGTTGCATCACCCTAACAACACTTCTTCTTGGGGCTACAATCATAATCATAATCATCTTACCATGGGAGTATCAGGATTGGATAATTCGATGTGGGTCTTAAATGGGTCTCCATCGCCAGCTAGTTTCAAATCTAATCTTTATCATCATCATCATCATCATCATCATCATAATCAGTTGCATCCTTATGGGATTGTTGGGATTGGGGCTTCTCATCATCAGAGTAGTGAAGAGGGGGCATCATCTTCGGGGATGAATTTGATGATGAGATCCAGATTTATGACAAAACTACCCTCTAAGAGAAGCATGAGAGCTCCTAGAATGCGTTGGACTACCACACTCCATGCCAGATTCGTTCACGCAGTTCAACTTCTTGGTGGTCATGAAAGAGCAACTCCAAAGTCAGTTCTGGAGCTGATGGATGTGAAAGATCTCACATTAGCTCATGTTAAAAGCCACTTGCAGATGTATAGAACAGTCAAGACCACTGACAAGCCTGCTGCTTCCTCAGGCCAATCAGATGGTTCTGGTGAAGATGACGTGTCTCCGATCGGTAGCAACGCCGATCGGAGCGGTCTTCCTCAGTTTTCTGATCAAAGAGGCCGGGCAGATCGGTCGGTGCAACAAGACGTAGAACACCCTTCTGCTACTACTCTATGGAGTAATTCTTCAAGCAGAGAGGCATGGCCACCACAGAATAATTGTTATGATATGGATAATGATCTCAGAAAAACTACTTTCCACTCACAACCAACTTCAGGATCAGGGCATAAAACTCAGGAATGTAATTCGAGCGAAGCAAGACTACTAGTGAAGAAAAATTTGTTAGATGTTAATATAGAATGCAATAAGAATCCATGCTTGGAGTTTACATTAGGAAGACCAGATTGGAATGGCGAAGGACATGCCTAA 1287 0.4452 MPLQGIAAIEPSSTTCASPDLSLHISLPSSSSLETHHQAPTDLSLPSNFFTDQPPPHNYNPSTPSTHFSHQIIMNSPSSEVGGLRPIKGIPVYHNHQRCFPFLPFDHHPTTTPKDLHHHHQQHKMWLHHPNNTSSWGYNHNHNHLTMGVSGLDNSMWVLNGSPSPASFKSNLYHHHHHHHHHNQLHPYGIVGIGASHHQSSEEGASSSGMNLMMRSRFMTKLPSKRSMRAPRMRWTTTLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDDVSPIGSNADRSGLPQFSDQRGRADRSVQQDVEHPSATTLWSNSSSREAWPPQNNCYDMDNDLRKTTFHSQPTSGSGHKTQECNSSEARLLVKKNLLDVNIECNKNPCLEFTLGRPDWNGEGHA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1300 428 Pfam Myb-like DNA-binding domain 232 283 IPR001005 -
Mibi05g1300 428 MobiDBLite consensus disorder prediction 368 387 - -
Mibi05g1300 428 MobiDBLite consensus disorder prediction 288 362 - -
Mibi05g1300 428 Gene3D - 230 287 - -
Mibi05g1300 428 MobiDBLite consensus disorder prediction 288 305 - -
Mibi05g1300 428 MobiDBLite consensus disorder prediction 335 356 - -
Mibi05g1300 428 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 231 284 IPR006447 GO:0003677
Mibi05g1300 428 SUPERFAMILY Homeodomain-like 228 284 IPR009057 -
Mibi05g1300 428 MobiDBLite consensus disorder prediction 370 387 - -
Mibi05g1300 428 FunFam Myb family transcription factor 229 287 - -
Mibi05g1300 428 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 19 425 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1300 Mibi-ChrMibi05 15659086 15663528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1300 19 422 G2-like Transcription Factor Family AT5G16560 41.497 6.94e-71 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi05g1300 Myb_DNA-binding 1.8e-05 CL0123