Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1293 ATGGATTTGGCCTCATTTATGCTGATTTTGCTATGCTTGCGTGTTTGCTTTATTCCGCACATGATTAACATATATAGTCCCAAGATTTCGACAACTATTTTAAAGAGATTACAAGTCTTTCCAACTTGCAAAGCATTTGGGGTAGAGGATCCCGTCAAAACGCATCGGTCCTTCATCATCATATCATATCATTGTACAATCACATTTCAAATCCAATTCTCTCTTTTCCCCCACCGTGATCTTCCTTGTGTGTTAGAGATGGTTTTGTCAGAGGCAGCCACCGAGTCAGAGGCAGATGCTTCCATTCATTCCATGTTTGCATCGAGGTATGTGAGAGTGCCACTGCCAAGGCTCAAGATGGCAGAGTATTCAATACCAAAGGAGGCGGCTTACCAGATTATCAACGACGAACTCATGCTGGATGGTAATCCAAGGCTCAATCTTGCCTCCTTCGTCACCACATGGATGGAGCCTGAGTGTGATAAGCTCATCTTGTCCTCCATCAACAAGAATTATGTCGACATGGATGAGTATCCTGTCACCACCGAGCTCCAGAATAGGTGTGTGAACATGATAGCGCGCCTTTTCAATGCACCACTTCAAGATTCAGACACAGCTGTGGGAGTTGGCACAGTTGGGTCATCGGAGGCCATCATGTTGGCCGGCTTGGCTTTCAAGAGAAAGTGGCAGAACAGAAGAAAAGCAGAGGGCAAGCCCTTCGACAAACCCAATATTGTCACTGGTGCTAATGTTCAGGTTTGCTGGGAGAAATTCGCTAGGTACTTTGAGGTGGAGTTGAAAGAGGTAAAGCTTAGGGAAGATTACTTTGTAATGGATCCTGAAAAAGCAGTGGAAATGGTGGATGAAAACACCATCTGTGTTGCTGCCATCCTTGGTTCCACCCTCAATGGGGAATTTGAAGATGTCAAACGCTTAAATGATCTCCTCATTGAGAAGAACAATGAAACTGGATGGGATACTCCAATTCATGTGGATGCAGCGAGTGGTGGATTTATAGCACCATTTATATATCCCGACATTGAATGGGACTTTCGCTTGCCACTTGTGAAGAGCATCAACGTTAGTGGACACAAATATGGACTTGTCTATGCAGGCATCGGTTGGGTCATTTGGAGAAGTAAGGAAGATTTGCCTGATGAGCTCATCTTCCACATCAACTACCTTGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGTCAAGTCATTGCTCAGTACTACCAGCTCATTCGCCTAGGCTATCAGGGATATAGGAATGTGATGGAGAATTGTAGAGACAACATGATAGTACTGAAAGAAGGGTTGGAAAAAACAGGGCGATTCAACATAATATCAAAAGACGATGGAGTTCCATTGGTGGCATTCACTTTGAAGGGTCATAGCCACTACAACGAATTCCAAATCTCAGATTTCTTGAAACGTTATGGTTGGATCGTGCCAGCATATACTATGCCTCCTGATGCTCAACACGTCACAGTCCTTCGAGTTGTTATAAGAGAAGACTTTTCTCGTACATTTGCAGAACGTCTTGTTATTGATATTCAGAAAGTGTTGCATGAGCTTGATTTGCTTCCTGGCCTGCCAATCGCGAGCACCACCATTAGTGTCACGGCAGAGATGGCAGAAAACGGCTATATTGTTCCCAAGAAGAGTGAGACTGAGACTCAAAGGGAAATTACTACGGTTTGGAGGAAGTTCGTGTCTGATAGGAAGAAGATGAACGATAAGATGAATGGCGTTTGTTGA 1779 0.4429 MDLASFMLILLCLRVCFIPHMINIYSPKISTTILKRLQVFPTCKAFGVEDPVKTHRSFIIISYHCTITFQIQFSLFPHRDLPCVLEMVLSEAATESEADASIHSMFASRYVRVPLPRLKMAEYSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLILSSINKNYVDMDEYPVTTELQNRCVNMIARLFNAPLQDSDTAVGVGTVGSSEAIMLAGLAFKRKWQNRRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLREDYFVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLIEKNNETGWDTPIHVDAASGGFIAPFIYPDIEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYQGYRNVMENCRDNMIVLKEGLEKTGRFNIISKDDGVPLVAFTLKGHSHYNEFQISDFLKRYGWIVPAYTMPPDAQHVTVLRVVIREDFSRTFAERLVIDIQKVLHELDLLPGLPIASTTISVTAEMAENGYIVPKKSETETQREITTVWRKFVSDRKKMNDKMNGVC 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1293 592 FunFam Glutamate decarboxylase 154 448 - -
Mibi05g1293 592 Gene3D - 87 153 - -
Mibi05g1293 592 FunFam Glutamate decarboxylase 87 153 - -
Mibi05g1293 592 Gene3D - 154 448 IPR015421 GO:0003824
Mibi05g1293 592 SUPERFAMILY PLP-dependent transferases 103 532 IPR015424 -
Mibi05g1293 592 CDD DOPA_deC_like 147 527 - -
Mibi05g1293 592 FunFam Glutamate decarboxylase 449 536 - -
Mibi05g1293 592 Gene3D - 449 536 - -
Mibi05g1293 592 PANTHER GLUTAMATE DECARBOXYLASE 87 583 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mibi05g1293 592 Pfam Pyridoxal-dependent decarboxylase conserved domain 123 469 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mibi05g1293 592 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 104 532 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1293 Mibi-ChrMibi05 15578214 15581935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1293 87 592 Calmodulin-binding Proteins AT5G17330 81.373 0.0 860
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1293 05 15578214 15581935 Mibi05g1293 05 15578214 15581935 ECH