Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1287 ATGGCTCCAGTTTCATTGCCGCCTGGTTTTAGGTTCCACCCTACGGATGAAGAGCTGGTTGCTTATTACCTCAAAAGAAAGATCAATGGCCACAAGATTGAGTTAGAGATCATCCCCGAAGTTGATCTTTACAAGTGTGAACCCTGGGACTTGCCTGGAAAATCATTGTTACCGGGAAAAGATTTGGAGTGGTATTTCTTCAGTCCACGAGATAGGAAGTACCCAAATGGGTCAAGAACAAATAGAGCCACAAAATCTGGATATTGGAAAGCCACAGGAAAAGACAGGAAAGTGAATTCACAATCACGTTCAGTGGGAATGAAGAAAACCCTTGTTTACTATCGAGGTCGAGCCCCTCATGGATGCCGTACCAATTGGGTCATGCATGAATATCGTCTTGACGAGAAAGAATGTGAAGTTGCTTCTGGCGTTCAGGATGCTTATGCTCTATGTCGTGTGTTCAAGAAGACTGCGATTATAACAACGAAAATCGGAGAGCACTATGTGAATAATGGAAATCAGGTTACAAATGCCAGTGATCAGTCATCTAGTGTTGAACTATACTCTGAAGGAAGAATATCAGGAGAAGATTTGGAGAGTTCGGATTATTTGATGCCAATGGATCATCATAGCTCGCCCCATGTTGGAAATCCATCTTCAGGACCGAAAGATCATGGAAAATCATGGTCTCAGACACAGTTCTTATCTGAAGAAGATCCTTTCTCTCTACCAAATTCTTCTTCATTATTTTCCAACTATGCCTCATTGCCTTACCCTCCATCCAAGGTGGATATTGCACTAGAGTGTGCCAGGATGCAACACAGATTTTCTCCAATGGAGAACTTCCCTTCTGAACTGAAGATGCAACCACAATATGGTGGGACAAAAAATGAAACCGATGATTTTTTAAATGAGATTCTTTCAGTTGCTCATGCTTCTCAGGAACTCATAAATAACCAGTCTTCTAACTATTCTTCTCATTCATGGGGTACAACTAGTGCTGCAGCAAACCAGCATTATTATGCTCCTTCTGAACAAGAAGATGGTTTCACTTTCATGGTTGGCAGAGATAGTGCTTCTGATTATAATGACTATAACTATTATAACAATAATGCCTCCTGGGAAGATCCAGTGAACACAAGGTCCATAGAGATTGGAGATCTGGAGGATGATTTCAAAGCAGAGCGGATGGTTGAGAATTTAAGATGGGTTGGTATGTCAAGCAAGGATCTGGAAATTAAGAGCTACATGGAAGATCAGAAAATTGTTCCAATTGAGGATATTTCAAGTTTCCGAGCAAACAGGGAGGGGAATGAACAGCTGCAAGAATGTGACGATCGGCAAGAAAATAGCGACAAGGAACTCAACGACACAGGCATAAACGACGTCTCATTAGGGTTCATCAACGAGGATGACACTAATAATGAGAACTTGGTAGAAGAAGAAGAAGGCGATGAAGATGATTATTCAAGTTCTCCAAGCTTTGAGGTGGTTGAGGAAGTCAAAGTCAACCATGGAATGTTTGTGTCCACAAGACAAGTAGCCGACACATTTTTTCACCAAATAGTTCCTTCACAAACACTAAAGGTTCATCTCAATCCAGTGATAATGGCTCATCACTCAGTGGAGAACATAGAGAAAGTTTCTTTCTTTAGAAACTTGAAGGCCTGTGTGATGAAGACAATAACAAGTCCCATTGTATTCATATTTACACGTCTGCTCATGCATTGTGTCTAA 1737 0.4116 MAPVSLPPGFRFHPTDEELVAYYLKRKINGHKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSRSVGMKKTLVYYRGRAPHGCRTNWVMHEYRLDEKECEVASGVQDAYALCRVFKKTAIITTKIGEHYVNNGNQVTNASDQSSSVELYSEGRISGEDLESSDYLMPMDHHSSPHVGNPSSGPKDHGKSWSQTQFLSEEDPFSLPNSSSLFSNYASLPYPPSKVDIALECARMQHRFSPMENFPSELKMQPQYGGTKNETDDFLNEILSVAHASQELINNQSSNYSSHSWGTTSAAANQHYYAPSEQEDGFTFMVGRDSASDYNDYNYYNNNASWEDPVNTRSIEIGDLEDDFKAERMVENLRWVGMSSKDLEIKSYMEDQKIVPIEDISSFRANREGNEQLQECDDRQENSDKELNDTGINDVSLGFINEDDTNNENLVEEEEGDEDDYSSSPSFEVVEEVKVNHGMFVSTRQVADTFFHQIVPSQTLKVHLNPVIMAHHSVENIEKVSFFRNLKACVMKTITSPIVFIFTRLLMHCV 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1287 578 FunFam Nac domain-containing protein 86 15 159 - -
Mibi05g1287 578 MobiDBLite consensus disorder prediction 202 231 - -
Mibi05g1287 578 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Mibi05g1287 578 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Mibi05g1287 578 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Mibi05g1287 578 MobiDBLite consensus disorder prediction 474 493 - -
Mibi05g1287 578 MobiDBLite consensus disorder prediction 438 456 - -
Mibi05g1287 578 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 284 - -
Mibi05g1287 578 MobiDBLite consensus disorder prediction 438 493 - -
Mibi05g1287 578 MobiDBLite consensus disorder prediction 213 231 - -
Mibi05g1287 578 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1287 Mibi-ChrMibi05 15494189 15498266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1287 1 578 NAC Transcription Factor Family AT1G65910 48.409 1.98e-166 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi05g1287 NAM 1.2e-40 No_clan