Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1284 ATGAAACCCAGCCTGAAGCTCGAAGCAATATGCTGTGGCCGCAAACGGAGAATCAGTCACACAGGTACATGTCCCAGAATTCCAAGCTTTGAGATGGAAGAAGAAGAAGAAGAAGAACAAGAACAAAGTTTAACAAGCTTCCTAAGATGGGCAAGAGAGCTCGGAATATCAGACGCAGCAATCACCAGTCTACCTCAACATTCAAATTCGTGTCTGGGTTCTTCTCTCTGCGTCTCCCATTTTCCTCATTCTGGGGGTAGAGGTTTGGGTGCAGTACGAGATCTTAGGAGGGGAGAATTGATCCTCAGAGTTCCAAAATCTGCCTTAATGACATCAGAGAATGTCATGCTAGATAAGAAGCTCTCCATTGCTGTTAATAACCACCCTTATCTCTCATCAGCCCAGATATTGGTCGTTTGCTTATTATATGAAATGGGCAAAGGAAAATCTTCAAAGTGGCATCCTTACCTCATGCATTTGCCGCACACTTATGACATACTAGCTACATTTGGTGAATTTGAGAAAGAAGCTCTTCAAGTGGATGAGGCTCGGTGGGTCACAGAAAAGGCTGTGTTAAAGGCCAAATCAGAATGGAAAGAAGCCAACGCTTTGATGGAAGAAATCAAACTCAAGTCCCAACTTTTAACGTTCAAGGCATGGCTTTGGGCTACTGCTACGATATCGTCCCGTACATTGCACATTCCATGGGATGAAGCTGGATGTTTATGCCCTGTGGGTGACCTGTTTAATTATGACGCACCTGGAAGGGAGCCTTCTGATCCTGAAGGTAAGGAAATTCTGTCAGCCAACTCTTCTGTCACAAATGTAGAGAATTCGTTAATGTTAGATGCAGTGGAGACTGATTCTCATTCTGAGAGTCAGAGATTAACAGATGGTGGGTTTGAGGAAGATGTGAATTCGTATTGCTTTTATGCTAGGGAAAATTACAAGCAAGGAGAGCAGGTATTATTATGCTATGGACTGTACACAAACTTAGAGCTTCTTGAACACTATGGTTTTCTCCTACCAGAAAATCCAAACGACAAAATTTTTATTCCTCTTGAATCTGCTGTATATTCTTCCAGTTCATGGCCTAAAGAGTCGCTCTATATTTGCCATGACGGGAAGCCTTCCTTTGCATTACTGTCGGCATTGAGGTTATGGGCGACCCCTAAAAATAAGCGCAAGTCTGTTGGGCATCTTGTGTATTCCGGTTCTCAATTGTCTGTGGACAATGAAGTTGCTGTCATGAAATGGCTGTCAAAGACTTCTGATTCTGCATTGAAGAGTTTGCCAACATCAATTGATGAAGACATTCTACTCCTAAATGCAATGGATAGTAGTCAAGATTTTTGTAGTTTCATGGAAATCACCAAACTGTTGTCTTCTAGGGATGAGATTTGTGCCTTTTTGCAGGCTAACAATCTGCAGGATGGGCATGGCTCAACTGATATACATGTATCCAGAAAAGCTAGAAGGTCCATGGACAAGTGGAAATTGGCTGTTCAATGGAGGCTTAGGTATAAGAAAGTCCTTGTGAATTGTATCTCTTATTGCAATGAAATACTTGAGTCTCTCTTGACGTAA 1587 0.4228 MKPSLKLEAICCGRKRRISHTGTCPRIPSFEMEEEEEEEQEQSLTSFLRWARELGISDAAITSLPQHSNSCLGSSLCVSHFPHSGGRGLGAVRDLRRGELILRVPKSALMTSENVMLDKKLSIAVNNHPYLSSAQILVVCLLYEMGKGKSSKWHPYLMHLPHTYDILATFGEFEKEALQVDEARWVTEKAVLKAKSEWKEANALMEEIKLKSQLLTFKAWLWATATISSRTLHIPWDEAGCLCPVGDLFNYDAPGREPSDPEGKEILSANSSVTNVENSLMLDAVETDSHSESQRLTDGGFEEDVNSYCFYARENYKQGEQVLLCYGLYTNLELLEHYGFLLPENPNDKIFIPLESAVYSSSSWPKESLYICHDGKPSFALLSALRLWATPKNKRKSVGHLVYSGSQLSVDNEVAVMKWLSKTSDSALKSLPTSIDEDILLLNAMDSSQDFCSFMEITKLLSSRDEICAFLQANNLQDGHGSTDIHVSRKARRSMDKWKLAVQWRLRYKKVLVNCISYCNEILESLLT 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1284 528 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 37 458 - -
Mibi05g1284 528 Pfam SET domain 86 327 IPR001214 GO:0005515
Mibi05g1284 528 SUPERFAMILY SET domain 43 345 IPR046341 -
Mibi05g1284 528 Gene3D - 354 527 IPR036464 -
Mibi05g1284 528 FunFam Protein SET DOMAIN GROUP 40 44 341 - -
Mibi05g1284 528 CDD SET_LSMT 75 341 - -
Mibi05g1284 528 ProSiteProfiles SET domain profile. 74 327 IPR001214 GO:0005515
Mibi05g1284 528 Pfam Rubisco LSMT substrate-binding 376 512 IPR015353 -
Mibi05g1284 528 Gene3D set domain protein methyltransferase, domain 1 40 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1284 Mibi-ChrMibi05 15445034 15447519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1284 44 355 NAC Transcription Factor Family AT3G56570 22.969 1.24e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi05g1284 SET 1.3e-10 No_clan