Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1276 ATGACCACTAAAGGATGGTGGCACATGCCTGCTGTCACATCAGTCTATAATGCACAATCCAGATTTCCCAGTACGGATCATCCAATGGCTGAGATTGATTCTTGCCATGACTCTCACAGAGACGCTCCTTCTCTTTCTCTCTCTACTGAACACAGGTTACAAGATTCTGTATCTTTAAAAGAAAGGAAAAGAAAAGTGGAGCTTGATATGAAGCTTTCAACATCAGGGTTGGGTCAGCAGGGACAAGAAGGAGGAGGAGGGGAGAAGAAATGTCTGAATTCCGAGCTATGGCATGCATGCGCGGGTCCTCTTGTGTCCCTACCAAATGCAGGGACTCGTGTGGTTTACTTCCCTCAGGGTCATAGCGAGCAGGTTGCAGCCACAACTAACAGAGAACTTGATGGACACATACCCAATTACCCGAGCTTGCCGCCCCAGTTGATTTGTCAACTTCATAATGTCACAATGCATGCTGATGTTGAAACAGATGAAGTATATGCTCAAATGACACTGCAACCATTGACTCCGCAAGAACAGAAGGAAACATTTCTTCCTTTGGAATTGGGCATTCCCAGCAAACAGCCCTCAAATTATTTCTGCAAGACATTAACAGCCAGTGATACCAGCACACATGGAGGGTTCTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTTCCTCCACTGGATTTCTCACAGCAACCACCGGCACAAGAACTAATTGCTAGGGACCTCCATGATGTTGAGTGGAAGTTCAGACATATTTTTCGTGGGCAGCCAAAACGACACCTTCTTACAACGGGCTGGAGTGTATTTGTTAGTGCCAAGAGACTTGTGGCTGGAGATTCTGTGCTATTTATATGGAATGAAAAGAATCAACTGCTTCTAGGAATACGCCGTGCCAGTCGGCCCCAAACTGTGATGCCATCATCAGTTCTTTCAACTGATAGTATGCACATTGGACTTCTTGCGGCTGCTGCTCATGCCGCTGCAACTAATAGCTGTTTTACAGTGTTCTATAATCCAAGGGCTAGTCCTTCTGAGTTTGTCATACCACTTTCAAAATATGTCAAGGCTGTGTACCATACACGTGTTTCAGTTGGCATGCGATTCAGGATGCTTTTTGAGACTGAGGAATCAAGTGTACGCAGGTACATGGGTACTATAACTGGCATAAGTGATTTGGATCCTGTTCGTTGGCCAAATTCTCATTGGCGATCTGTGAAGGTTGGTTGGGATGAATCAACAGCAGGAGATAGGCAGCCACGGGTATCATTATGGGAAATTGAGCCTTTAACAACATTCCCAATGTATCCATCGCTATTCCCCCTCAGACTGAAGCGGCCATGGCATCCTGGCTCTTCATCTTTGCACGATGGAAGAGATGAAGCCGGACTGATGTGGCTGAGAGGTGGACCGGGAGATCAAGGTCTCAGCTCCCTCAATTTTCCAGGCGGTGGTTTGTTGCCGTGGATGCAACAGAGACTAGATCCAACTTTGCTAGGAAATGACCATAATCATCAGTATCAAGCCATGTTGGCAGCTGGTATGCAGAACCTAGGAGGGAGTGGAGATCTCTTGCGTCAGCAAATGATGCATTTGCAGCAACCCTTCCATTATCTCGGAAACTCTAATTCTCTGCAGCTTCAGCAGCCACATCAAGCAATTCAGCAATCGATGAGTTCTAATATCCTTCAGCCACAAACTCAAGTGTTGGCAGAGAACTTGTCTCCGCACCTCCTTCAGAAACCTCATAATAGTCAAGAAGACCAAGCGCCGCCACAGCAGCAGCCACATAATAACTATCATGATGCAATTTTTTTTCAGGGTGATCAGCTCCCACAGAGGCAACACTCACATGCTCCTTCACCATCATACTCGAAACCTGATTTCTTTGATTCGAGCATAAAGTTCTCTTCGGTTTCCCCTGGACAAAACATGCTCAGTTCACTTTGTCCTGAAGGGAGTAGCAACCTTTTCAACTTGCCAAGAAGCAGTCAGTCCATGCTGACTGACCAATTAGCCCAACAATCTTGGAGTCCGAAGTATCCACCTGTGCAGGTGAGTGCTTCCTTTGGCAACTCAATGTCACACTCACAATATGCAGAGAAAAATTCTGCGACGGTGCCATCACATTGTACTTCAGATGCCCAAAATCCTACACTATTTGGTGTTAATATTGATTCGTCTGGACTTCTGCTCCCCACCACTGTCCCTGGTTTCTCAACATCCTCGGTTGGTACTGATGCGTCGACCATGCCATTAGGGGACTCTGGATTCCATGCTCCTCTGTATAATTGTGTGCAAGATTCTGCAGAGTTGATTCAGAGTTCAGGGCAAGTTGACTCACAAAACCAAACTCAGACATTTGTTAAGGTATACAAATCCGGTTCGGTTGGGCGCTCACTTGACATCTCTCGGTTCAGCAGCTATCATGAGCTGAGAGAGGAGTTGGCCCAAATGTTTGGAATTGAGGGGAAGTTGGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGTTCTTCTCCTTGGAGACGACCCGTGGGAATCATTCGTGAATAACGTTTGGTACATTAAGATACTCTCACCTGAGGATATTATGAAGATGGGCGAGCAATCGGTGGAATCGCTTGGTCCGTCGAACGGGGGACAAAGGATGAACAGCAGCACTGCAGAATCTCAGGACCTTTCTGGCTTTCCATCAATGGGCTCGCTTGAATACTGA 2742 0.4661 MTTKGWWHMPAVTSVYNAQSRFPSTDHPMAEIDSCHDSHRDAPSLSLSTEHRLQDSVSLKERKRKVELDMKLSTSGLGQQGQEGGGGEKKCLNSELWHACAGPLVSLPNAGTRVVYFPQGHSEQVAATTNRELDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPLELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSTDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGSSSLHDGRDEAGLMWLRGGPGDQGLSSLNFPGGGLLPWMQQRLDPTLLGNDHNHQYQAMLAAGMQNLGGSGDLLRQQMMHLQQPFHYLGNSNSLQLQQPHQAIQQSMSSNILQPQTQVLAENLSPHLLQKPHNSQEDQAPPQQQPHNNYHDAIFFQGDQLPQRQHSHAPSPSYSKPDFFDSSIKFSSVSPGQNMLSSLCPEGSSNLFNLPRSSQSMLTDQLAQQSWSPKYPPVQVSASFGNSMSHSQYAEKNSATVPSHCTSDAQNPTLFGVNIDSSGLLLPTTVPGFSTSSVGTDASTMPLGDSGFHAPLYNCVQDSAELIQSSGQVDSQNQTQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIMKMGEQSVESLGPSNGGQRMNSSTAESQDLSGFPSMGSLEY 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1276 913 Gene3D - 197 300 IPR015300 -
Mibi05g1276 913 MobiDBLite consensus disorder prediction 581 601 - -
Mibi05g1276 913 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 88 876 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mibi05g1276 913 ProSiteProfiles B3 DNA-binding domain profile. 199 301 IPR003340 GO:0003677
Mibi05g1276 913 ProSiteProfiles PB1 domain profile. 787 871 IPR000270 GO:0005515
Mibi05g1276 913 FunFam Auxin response factor 363 435 - -
Mibi05g1276 913 SUPERFAMILY CAD & PB1 domains 778 861 - -
Mibi05g1276 913 MobiDBLite consensus disorder prediction 880 906 - -
Mibi05g1276 913 SUPERFAMILY DNA-binding pseudobarrel domain 183 328 IPR015300 -
Mibi05g1276 913 Gene3D - 782 876 - -
Mibi05g1276 913 MobiDBLite consensus disorder prediction 27 57 - -
Mibi05g1276 913 FunFam Auxin response factor 197 301 - -
Mibi05g1276 913 Pfam B3 DNA binding domain 199 300 IPR003340 GO:0003677
Mibi05g1276 913 SMART B3_2 199 301 IPR003340 GO:0003677
Mibi05g1276 913 Pfam Auxin response factor 325 408 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mibi05g1276 913 Gene3D - 363 435 - -
Mibi05g1276 913 CDD B3_DNA 198 299 IPR003340 GO:0003677
Mibi05g1276 913 FunFam Auxin response factor 782 876 - -
Mibi05g1276 913 MobiDBLite consensus disorder prediction 879 913 - -
Mibi05g1276 913 Pfam AUX/IAA family 780 873 IPR033389 -
Mibi05g1276 913 MobiDBLite consensus disorder prediction 30 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1276 Mibi-ChrMibi05 15294540 15301657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1276 169 884 B3 DNA Binding Superfamily AT5G37020 68.493 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi05g1276 AUX_IAA 3.8e-08 CL0072