Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi05g1272 | ATGGCGGATGTAGTAGCTCCTCCCAGCAATGACTTCACTGAACCAATCAACGATGTTAAGCTCTTTAATCGTTGGACCTTCGATGATGTTCAGGTGAATGACATATCCCTGGCAGATTACATTGGTGTGGCTCCTGCCAAGCATGCAACCTATGTGCCTCACACTGCAGGGAGATATTCTGTCAAGCGTTTCAGGAAAGCACAATGCCCAATTGTGGAGAGGCTTACCAACTCTCTTATGATGCACGGAAGAAACAACGGGAAAAAGCTGATGGCAGTGAGGATCATAAAGCATGCCATGGAAATTATCCACTTGCTCACTGATCTAAACCCAGTCCAAGTTATTGTTGATGCTGTGATCAACAGTGGGCCAAGGGAAGATGCTACACGAATTGGGTCTGCTGGTGTTGTCAGACGTCAGGCAGTAGATATTTCTCCCCTGCGTCGTGTGAATCAGGCTATCTATCTCCTTACTACTGGTGCTCGTGAGTCTGCATTTAGGAACATTAAGACAATTGCAGAATGTTTGGCTGATGAACTAATCAATGCTGCAAAGGGATCATCAAACAGCTATGCCATTAAGAAGAAGGACGAGATTGAGAGAGTTGCCAAGGCTAACCGTTGA | 624 | 0.4583 | MADVVAPPSNDFTEPINDVKLFNRWTFDDVQVNDISLADYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPVQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi05g1272 | 207 | FunFam | 40S ribosomal protein S5 | 4 | 207 | - | - | |
| Mibi05g1272 | 207 | SUPERFAMILY | Ribosomal protein S7 | 20 | 207 | IPR036823 | - | |
| Mibi05g1272 | 207 | CDD | uS7_Eukaryote | 20 | 207 | IPR005716 | GO:0003735|GO:0006412|GO:0015935 | |
| Mibi05g1272 | 207 | Pfam | Ribosomal protein S7p/S5e | 61 | 207 | IPR023798 | - | |
| Mibi05g1272 | 207 | ProSitePatterns | Ribosomal protein S7 signature. | 73 | 99 | IPR020606 | GO:0003723|GO:0003735|GO:0006412 | |
| Mibi05g1272 | 207 | Gene3D | Ribosomal protein S7 domain | 2 | 207 | IPR036823 | - | |
| Mibi05g1272 | 207 | TIGRFAM | uS7_euk_arch: ribosomal protein uS7 | 19 | 207 | IPR005716 | GO:0003735|GO:0006412|GO:0015935 | |
| Mibi05g1272 | 207 | PIRSF | RPS7p_RPS7a_RPS5e_RPS7o | 4 | 207 | IPR000235 | GO:0006412 | |
| Mibi05g1272 | 207 | PANTHER | RIBOSOMAL PROTEIN S7 | 5 | 207 | IPR000235 | GO:0006412 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi05g1272 | Mibi-ChrMibi05 | 15271912 | 15273658 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi05g1272 | 17 | 207 | Cytoplasmic Ribosomal Protein Gene Family | AT2G37270 | 91.623 | 8.26e-135 | 374 |