Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1257 ATGTATCTTTCGGAGTTCTGGAAGTATAAAGCTGTATTCAGCTTGTGGTTCTGTTTCTGGTTTCTTCTGGTTGCTGTGCAGGGTTCTGTCACTGATCCTGATGAAGTTAACGCATTGAGAACCATCAAAAACCGGTTGATCGATCCTAAAGGAAATCTGAACGATTGGAATAGTGGAGATCCGTGTACATCTAAGTGGAGAGGGGTTTATTGTTTCAACAGGACACTGGCTGATGACTATTTGCATGTGCAAGAATTGCGACTACTGAATTTGAACTTGTTTGGAATTTTGGCACCAGAGATCGGAAATTTATCGTATCTGGAAATAATGGACTTCATGTGGAACAATATAAGTGGGAGCATACCACCGCAAATTGGCAACATCAAAAGTTTGCAACTCTTGCTTTTGAATGGAAACGAATTGATAGGTCAGCTGCCTGAAGAGCTTGGTTATCTTCCAAATCTGAATAGAATACAAATCGATCAGAACAATATAACAGGACCTATTCCTGCATCATTTGCAAACCTAAACAATACAAGGCACTTTCACATGAACAATAACTCGCTTACTGGACATATCCCTCCAGGGTTTTCCCGCTTGTCAAGCCTTATTCACCTCCTTCTTGACCACAACAACTTAACAGGAGACCTTCCAGACGAGCTCTCCAAGATGCCAAGCATACGCATAATCCAGCTTGATAACAATGATTTTGGCGGGACTACCATTCCAGATTCATATGGAAACATTCCGACATTGTTGAAGTTGAGCCTTCGGAACTGCAACTTGCAAGGACCAATCCCTGATTTCAGCAGGATACCAAGCCTTCTATATCTTGACCTCAGTTCCAATCAATTGAATGGATCGATTCCTTCTAATAAGCTTTCTGACAAAGTCACAACCATTGATTTGTCATACAACAAGCTTATTGGAAATATTCCATCCAACTTTTCTGGTCTCCCAAGTCTTCAACTATTGTCACTTTCAAACAATTCGTTGAATGGAAGTGTTCCTTCCACCATCTGGCAGGGTAGGACTTCAAATGGAATGCAAGGATTGATCTTGGATTTTCAAAATAATAATCTTTCAAGCATATCAGGAACTATTGATCTTCCTCTTAACATCACAGTTAGGCTCGAAGGAAATCCTATTTGCCCTAATAACACTCTTGTTCAGTTCTGTGGACCTGCAAGTGTCATTGACATGAACAACTCGAGTCTAACAGACTCCAGTGTTGACTGTCCCCCTCAAGCATGCCCTCCTCCTTATGAATATTCCAGAACATCTTCTGTAAAGTGTTTTTGTGCAATGCCATTGCTCATTGGTTATCGATTGAAAAGTCCTGGATTTTATGAATTTAATCCATACCAGGCAAAATTTGTGAACTTCATGGCATCCAATTATACTTTAACGGATAACCAAGTTGATATTGGCAACCCTCAAATGCAAGGACTTCGACTGAAAATGTACTTGAAGCTTTTTCCAGAAGCTATCGATGACAAAAGCTCCCAAACTTTCAACGAAAGCGAGGTTCTGCGTCTTTATAGCATGTTTACAGGATGGGTTGTTTCAGACAATGAACTTTTCGGACCTTATGAACTGCTCAACTTCACTCTTTTGGGTCCTTACAAGGATATGTTGTTTGGTCGCACTACAAGTTCAGGGATAAGCAAGGGTGCATTAGCTGGTATTATCTTAGGGTCAATTGCCGGTGCAGTTACATTATCTGCAATTGTGACTCTTCTTATCATGAGGGCACGGATGAGAGAGTACCATGCTCTTTCATCAAGGCGGCAATTTTCCAGAATATCAATAAAAATTGAAGGTGTGCGGAGCTTCACTTATGAAGAAATGGCCTTGGCTGCTAACAATTTTAGTGACTCTAGTTTTGTTGGCCAGGGAGGCTATGGGAAAGTTTATAGAGGTATTCTTACTGATGGCACCGTTGTAGCAATAAAACGTGCACAGGTGGGATCACTGCAAGGTGAGAGGGAGTTCCTTACAGAAATACAATTACTATCAAGGATACATCATCGCAACCTCGTGACTTTGGTTGGATATTGTGATGAAGGAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGCACGCTAAGGGATCATCTTTCCGCTGATTCGAGACAACCTCTGAGTTTTGATATGAGATTGAGGATTGCACTAGGATCAGCCAAGGGCATCCTGTATCTACATACGGAAGCTGATCCTCCCATATTCCACAGAGATGTCAAGGCCAGCAACATATTATTGGACTCCAGGTTAAATGCTAAAGTTGCTGATTTTGGACTTTCACGCCTTGCTCCAGTTCCAGATACTGAAGGGATTGTGCCTGCTCATGTATCTACAGTGGTAAAGGGAACCCCGGGCTACCTTGACCCAGAGTACTTTTTAACTCATAAGTTGACTGATAAGAGCGATGTTTATAGTTTTGGCGTTGTACTTCTAGAACTTTTGACAGGGAAGCCACCAATCTCGCATGGCAAAAATCTTGTCAGAGAGGTTATTGTAGCGTACCAATCAGGTGAAGTATTCTCAGTGATTGATGGACGCATGGGACCCTATCCTTCTGAGCAGCTGGGGAAGTTGTTAAATCTGGCCCTAAAGTGTAGCAAAGACGACCCAGATGCACGACCTAAAATGGCAGAAGTTGTTCGAGAGCTTGAAAACATGTGGTCCGCGATGCCAGAGTCCAATGCCAGGATACCTGAATATATATCCAGTGATTCTGGAAAATTATTCAGTTCTACACCATCTTCGTCCTCAAATAGCAAAACTCCTTTCATATCGGGCGATACGTCAGGTAGCGGACTTGTTAGTGGAGTAGAGCCAACCATTAGGCCACGGTAG 2865 0.4213 MYLSEFWKYKAVFSLWFCFWFLLVAVQGSVTDPDEVNALRTIKNRLIDPKGNLNDWNSGDPCTSKWRGVYCFNRTLADDYLHVQELRLLNLNLFGILAPEIGNLSYLEIMDFMWNNISGSIPPQIGNIKSLQLLLLNGNELIGQLPEELGYLPNLNRIQIDQNNITGPIPASFANLNNTRHFHMNNNSLTGHIPPGFSRLSSLIHLLLDHNNLTGDLPDELSKMPSIRIIQLDNNDFGGTTIPDSYGNIPTLLKLSLRNCNLQGPIPDFSRIPSLLYLDLSSNQLNGSIPSNKLSDKVTTIDLSYNKLIGNIPSNFSGLPSLQLLSLSNNSLNGSVPSTIWQGRTSNGMQGLILDFQNNNLSSISGTIDLPLNITVRLEGNPICPNNTLVQFCGPASVIDMNNSSLTDSSVDCPPQACPPPYEYSRTSSVKCFCAMPLLIGYRLKSPGFYEFNPYQAKFVNFMASNYTLTDNQVDIGNPQMQGLRLKMYLKLFPEAIDDKSSQTFNESEVLRLYSMFTGWVVSDNELFGPYELLNFTLLGPYKDMLFGRTTSSGISKGALAGIILGSIAGAVTLSAIVTLLIMRARMREYHALSSRRQFSRISIKIEGVRSFTYEEMALAANNFSDSSFVGQGGYGKVYRGILTDGTVVAIKRAQVGSLQGEREFLTEIQLLSRIHHRNLVTLVGYCDEGGEQMLVYEFMPNGTLRDHLSADSRQPLSFDMRLRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRLNAKVADFGLSRLAPVPDTEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSFGVVLLELLTGKPPISHGKNLVREVIVAYQSGEVFSVIDGRMGPYPSEQLGKLLNLALKCSKDDPDARPKMAEVVRELENMWSAMPESNARIPEYISSDSGKLFSSTPSSSSNSKTPFISGDTSGSGLVSGVEPTIRPR 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1257 954 Pfam Protein tyrosine and serine/threonine kinase 630 893 IPR001245 GO:0004672|GO:0006468
Mibi05g1257 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Mibi05g1257 954 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 194 - -
Mibi05g1257 954 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Mibi05g1257 954 CDD STKc_IRAK 630 896 - -
Mibi05g1257 954 MobiDBLite consensus disorder prediction 915 945 - -
Mibi05g1257 954 SMART LRR_typ_2 200 224 IPR003591 -
Mibi05g1257 954 SMART LRR_typ_2 272 296 IPR003591 -
Mibi05g1257 954 SMART LRR_typ_2 128 152 IPR003591 -
Mibi05g1257 954 SMART LRR_typ_2 319 343 IPR003591 -
Mibi05g1257 954 PRINTS Leucine-rich repeat signature 275 288 - -
Mibi05g1257 954 PRINTS Leucine-rich repeat signature 319 332 - -
Mibi05g1257 954 Gene3D Ribonuclease Inhibitor 31 294 IPR032675 -
Mibi05g1257 954 PANTHER RECEPTOR-LIKE PROTEIN 55 42 897 - -
Mibi05g1257 954 Gene3D Transferase(Phosphotransferase) domain 1 700 911 - -
Mibi05g1257 954 SUPERFAMILY L domain-like 47 395 - -
Mibi05g1257 954 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Mibi05g1257 954 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 700 909 - -
Mibi05g1257 954 SMART serkin_6 624 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1257 954 ProSitePatterns Protein kinases ATP-binding region signature. 630 652 IPR017441 GO:0005524
Mibi05g1257 954 FunFam Leucine-rich repeat protein kinase family protein 588 699 - -
Mibi05g1257 954 Gene3D Phosphorylase Kinase; domain 1 595 699 - -
Mibi05g1257 954 ProSiteProfiles Protein kinase domain profile. 624 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1257 954 Gene3D Ribonuclease Inhibitor 295 384 IPR032675 -
Mibi05g1257 954 MobiDBLite consensus disorder prediction 915 954 - -
Mibi05g1257 954 SUPERFAMILY Protein kinase-like (PK-like) 609 924 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1257 Mibi-ChrMibi05 15131014 15138573 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1257 18 907 Receptor kinase-like Gene Family AT5G01950 57.508 0.0 977
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mibi05g1257 PK_Tyr_Ser-Thr 4.6e-46 CL0016