Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1254 ATGTCTATTCTGAAGTTCTGGAAGTATGAAGCTGTGTTCATGTTATGGTTCTGTTTCTGGTTGCTTTTAGTCACTGCGCAGGGCCCTGTCACTGATCCTGATGAAGTTAACGCATTGAGAACCATCAAAAACCATTTGATCGATCCTAATGGAAATCTGAACGACTGGAATAGTGGAGATCCATGTACATCTAAGTGGAGAAGGGTTTATTGTTTCAACAGGACATTGCCTGATGGCTATTTGCATGTGCAAGAATTGCGACTACTGAAGTTGAACTTGTTTGGAATTTTGGCACCAGAGATCGGAAATTTATCGTATTTGGAAATAATGGACTTTATGTGGAACAATATAAGTGGGAGTATACCACCACAAATTGGCAACATCAAAAGTTTGCAACTCTTGCTTCTGAATGGAAACAAATTCATAGGTCAGCTGCCTGAAGAGCTTGGTTATCTTCCAAATATGAAAAGAATACAAATTGATGAGAACAATATAACAGGACCTATTCCTACATCGTTTACAAACCTAAACAATACAAGGCACTTTCACATGAACAATAACTCACTTACTGGACATATCCCTCCAGGGTTTTCCCGCTTGTCAAGCCTTGTTCACCTCCTTCTTGACCACAACAATTTAACAGGAGACCTTCCAGATGAGCTCTCCAAGATGCCAAACATACGCATAATCCAGCTTGATAACAATGATTTTGGTGGGGCTACCATTCCAGATTCATATGGCAGCATTCCGACATTGTTGAAGTTGAGCCTTCGGAACTGCAACTTGCAAGGACCAATCCCTGATTTCAGCAGGATAACAAACCTTCTATATCTTGACCTCAGTTCCAATCGATTGAATGGATCGATTCCTTCTAATAATCTTTCTGACAAAGTCACAACCATTGATTTTTCAAACAACAAGTTTACTGGAAATATTCCTTCCAACTTTTCTGGTCTCCCAAGCCTTCAAATATTGTCACTTTCAAACAATTCGTTGAATGGAAGTGTTCCTTCCACCATTTGGCAGGATAGGACTTCAAATGGAATGCAAGGATTGATCTTGGATTTTCAAAATAATAATCTTTCAAGCATATCAGGAAATCTTGATCTTCCTCTTAACATCACAGTCAGGCTTGAAGGAAATCCTATTTGTCCCAATGGCACTCTTGTTCAGTTCTGTGGATCTGCAAGTGTCAATGACGCGAACAACTCTAGTCGAACAGACACCAGCGTGGATTGTCCCCCTCAAGCATGCCCTACTCCTTATGAATATTCCAGAACATCTTCTGTGAAGTGTTTTTGTGCAATGCCATTGCTCATTGGTTATCGATTGAAAAGTCCTGGATTTTACGATTTTCATCCATACCAGACAAAATTTGTGTACTTCATGGCATCCAATTATACTTTAACGAATAATCAGGTTGATATTGGCACTCCTCAAATGCAAGGACTTCGACTGAAAATGTACTTGAAACTTTTTCCAGAAGCTATCGATAACAAAAGCTCCCATACTTTCAATAAAAGTGAGGTTATGCGTCTTTATAGCATGTTTGCAGGACGGGTTGTTTCAGAAAATGAATTTTTCGGACCTTATGAACTGCTCAACTTCACTCTTCTGGGTCCTTACAAGGATATGTTCTTTGGCCCCACCACAAGTTCAGGGATAAGCAAGGGTGCATTGGCTGGTATTATCTTAGGAACAATTGCCGGTGCAGTTACATTATCTGCAATTGTGACTCTTCTTATCATGAGGGCACTGATGAGAGAGTACCATGCTCTTTCATCAAGGCGGCAATTTTCCAGAATATCAATAAAAATTGAAGATGTGCGGAGCTTCACTTATGAAGAAATGGCCTTGGCTACTAAAAATTTTGGCGACTCTAGTTTTGCTGGCCAAGGGGGCTATGGGAAAGTTTATAGAGGTATTCTTACTGATGGCACCGTTGTAGCAATAAAACGTGCACAGGTAGGATCATTACAAGGTGAGAGGGAGTTCCTTACAGAAATACAATTACTATCAAGGTTACATCATCGCAACCTTGTGACATTGGTTGGATATTGTGATGAAGGAGGTGAACAGATGCTAGTTTATGAATTTATGCCAAATGGCACGCTAAGAGATCATCTTTCTGCTAATTCGAGACAACCTCTGAGTTTTGATATGAGATTGAGGATTGCACTAGGATCAGCCAAGGGCATCCTGTATCTACATACGGAAGCTGATCCTCCCATATTCCACAGAGATGTCAAGGCCAGCAACATACTATTGGACTCTAGGTTAAACGCTAAAGTTGCTGATTTTGGACTTTCACGCCTTGCTCCAGTTCCAGATACTGAAGGGATTGTGCCTGCTCATGTATCTACAGTGGTAAAGGGAACCCCGGGCTACCTTGACCCAGAGTACTTTTTAACTCATAAGTTGACTGATAAGAGTGATGTTTATAGTTTTGGCGTTGTACTTCTAGAACTTTTGACAGGGAAGCCACCAATCTCACATGGCAAAAATCTTGTCAGAGAGGTTATTATCGCGTACCAATCTGGTGAAGCGTTCTCGGTGATTGATGGACGCATGGGACCTTATCCTTCTGAGCAGCTGGGGAAGTTCTTGAATCTGGCGCTAAAGTGTAGCAAAGACGAGCCAGATGCACGACCTAAAATGGCAGAAGTTGTTCAAGAACTTGAAAACATGTGGTCCATGATGCCTGAGTCTAATGCCAGGATACCTGAATATATATCCACTGATTCTGGAAAATTATTCAGTTCTTCACCATCTTCGTCCTCAGCTAGCAAAACTCCTTTTATATTGGGTGATATGTCAGGTAGTGAACTTGTTAGTGGAGTAGAGCTAACCATCAGGCCACGTAATCAGAAATGGACTGATATGCATCATTATACCTATGTTGGTACCTTAGCCATAGCAGCTTCTGATCACAATCCTATAGGGGTGCTTACTGAAACCATGCACATTTTGACGTTCATTGTTTTCGCACCTAAGAATAAGAAGCTCAAAATTGTTGGCTTCTCAGTGCTCGTGCTTGCGGTGTTCTCTGCGGTGGCCGTTGTCTCCCTCTCGGCGTTTCACGGCGAGCCCAGGATGGTCTTCTGCGGCCTCACTGCCACCATATTCTCTATCTTCATGTATGGGTCACCCGTTTCTATCATTGTGCCAAATGGGGTGGGTGCTGCCTTAGGTGCAGTCCCACTCTTACTCTTCTTCTTGTATCGTGACACTAATTAA 3237 0.418 MSILKFWKYEAVFMLWFCFWLLLVTAQGPVTDPDEVNALRTIKNHLIDPNGNLNDWNSGDPCTSKWRRVYCFNRTLPDGYLHVQELRLLKLNLFGILAPEIGNLSYLEIMDFMWNNISGSIPPQIGNIKSLQLLLLNGNKFIGQLPEELGYLPNMKRIQIDENNITGPIPTSFTNLNNTRHFHMNNNSLTGHIPPGFSRLSSLVHLLLDHNNLTGDLPDELSKMPNIRIIQLDNNDFGGATIPDSYGSIPTLLKLSLRNCNLQGPIPDFSRITNLLYLDLSSNRLNGSIPSNNLSDKVTTIDFSNNKFTGNIPSNFSGLPSLQILSLSNNSLNGSVPSTIWQDRTSNGMQGLILDFQNNNLSSISGNLDLPLNITVRLEGNPICPNGTLVQFCGSASVNDANNSSRTDTSVDCPPQACPTPYEYSRTSSVKCFCAMPLLIGYRLKSPGFYDFHPYQTKFVYFMASNYTLTNNQVDIGTPQMQGLRLKMYLKLFPEAIDNKSSHTFNKSEVMRLYSMFAGRVVSENEFFGPYELLNFTLLGPYKDMFFGPTTSSGISKGALAGIILGTIAGAVTLSAIVTLLIMRALMREYHALSSRRQFSRISIKIEDVRSFTYEEMALATKNFGDSSFAGQGGYGKVYRGILTDGTVVAIKRAQVGSLQGEREFLTEIQLLSRLHHRNLVTLVGYCDEGGEQMLVYEFMPNGTLRDHLSANSRQPLSFDMRLRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRLNAKVADFGLSRLAPVPDTEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSFGVVLLELLTGKPPISHGKNLVREVIIAYQSGEAFSVIDGRMGPYPSEQLGKFLNLALKCSKDEPDARPKMAEVVQELENMWSMMPESNARIPEYISTDSGKLFSSSPSSSSASKTPFILGDMSGSELVSGVELTIRPRNQKWTDMHHYTYVGTLAIAASDHNPIGVLTETMHILTFIVFAPKNKKLKIVGFSVLVLAVFSAVAVVSLSAFHGEPRMVFCGLTATIFSIFMYGSPVSIIVPNGVGAALGAVPLLLFFLYRDTN 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1254 1078 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 194 - -
Mibi05g1254 1078 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Mibi05g1254 1078 Gene3D Transferase(Phosphotransferase) domain 1 700 910 - -
Mibi05g1254 1078 FunFam Leucine-rich repeat protein kinase family protein 588 699 - -
Mibi05g1254 1078 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Mibi05g1254 1078 SUPERFAMILY L domain-like 47 399 - -
Mibi05g1254 1078 SMART LRR_typ_2 200 224 IPR003591 -
Mibi05g1254 1078 SMART LRR_typ_2 128 152 IPR003591 -
Mibi05g1254 1078 SMART LRR_typ_2 272 296 IPR003591 -
Mibi05g1254 1078 SMART LRR_typ_2 319 343 IPR003591 -
Mibi05g1254 1078 Pfam Protein tyrosine and serine/threonine kinase 631 893 IPR001245 GO:0004672|GO:0006468
Mibi05g1254 1078 PANTHER RECEPTOR-LIKE PROTEIN 55 42 897 - -
Mibi05g1254 1078 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Mibi05g1254 1078 PRINTS Leucine-rich repeat signature 275 288 - -
Mibi05g1254 1078 PRINTS Leucine-rich repeat signature 319 332 - -
Mibi05g1254 1078 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 700 909 - -
Mibi05g1254 1078 ProSiteProfiles Protein kinase domain profile. 624 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1254 1078 SUPERFAMILY Protein kinase-like (PK-like) 609 922 IPR011009 -
Mibi05g1254 1078 Gene3D Ribonuclease Inhibitor 296 382 IPR032675 -
Mibi05g1254 1078 Gene3D Ribonuclease Inhibitor 31 295 IPR032675 -
Mibi05g1254 1078 CDD STKc_IRAK 631 896 - -
Mibi05g1254 1078 SMART serkin_6 624 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1254 1078 Gene3D Phosphorylase Kinase; domain 1 586 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1254 Mibi-ChrMibi05 15099564 15117094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1254 9 907 Receptor kinase-like Gene Family AT5G01950 56.498 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mibi05g1254 PK_Tyr_Ser-Thr 2.1e-45 CL0016