Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1250 ATGAAGTTCTATTCACCTTCATTGCAACCTATCCTTTTGGTCATTGGTATTCTTTTTCCTCTGGCTATTGCTGACTTAAATTCAGAAAAGCAAGCCCTTCTTAGTTTTGCTAATGCAATCCCCCATCGCCGGAACCTTAAGTGGGATCCATCCTCCTCCGTTTGTAAGTCTTGGGTTGGCATCACTTGCAATCCAGATGGCACTCACGTTGTTTCTGTCAGGCTCCCTGGTGTTGGACTTGTTGGATCCATCCCATCTGATACACTTGGAAAGCTTGACCACCTTAAAACTATAAGCCTTCGATCCAACCTACTCAGTGGAAATTTACCTACCGATATTACCTCTCTTCCTTCCCTCCAGTATCTCTACCTCCAGCATAATAACCTTTCAGGGGATATACCTACCTCATTTTCACCCCAACTAAATGCACTTGATCTGTCTTATAATTCTTTCACCGGTGTAATTCCAGAGACATTTCAAAATTTAACAGAACTGAATAGATTATACCTTCAGAACAACTCCCTTTCTGGGCAGATACCTAATCTCAATGTCTCTAACCTCAAGCTTTTGAACTTAAGTTACAACCAATTGAATGGCTCTATCCCGAAAGCTCTTCAGAAATTTCCTAACTCATCCTTTGAAGGGAATTCTCTCTTGTGTGGACAACCTCTAAAGCCTTGCTCTTCTGTCCCTCCAACACCTTCTCCTGCCTTACCTCCGGCTGCACCATTGGCTCCAAAAAGACAAAGCTCCAAGAATAAATTGAGTAAGGTTGCAATCATTGCAATTGCTGTTGGAGGAGCTGTTCTGCTGTTACTTATAGCTCTTGTTATTGTTCTCTGCTGTTTAAAGAAGAAAAATGATGGAAGATCCAGTGTAAATAAAGGGAAGGGTCCTAGTGTTGGGAGGGGTGAGAAGCCTAAGGAAGAGTTTGGCAGTGGGGTGCAAGAACCCGAGAAAAACAAGTTGGTTTTCTTTGAGGGCTGTTCCTATAATTTTGATCTCGAGGATTTGCTAAGAGCTTCAGCTGAAGTTCTGGGAAAGGGTAGCTATGGTACTGCATATAAGGCTGTATTGGAGGAGTCAACCACTGTTGTGGTGAAAAGGTTGAAAGAAGTAGTGGTGGGCAAGAGAGACTTTGAACAGCAGATGGAGACTGTGGGAAGGGTTGGGCAGCATCCAAATGTTGTACCCCTTCGTGCTTATTATTATTCAAAGGATGAGAAGCTTTTGGTCTATGACTATATCCCAGGGGGCAACCTGTCAACGCTATTGCATGGTAGTAGGTCAGGTGGTAGAGCTCCGTTAGATTGGGATTCGCGCCTGAAGGTCTCCCTAGGAGCTGCACGAGGAATTGCCCACATGCATTCTGTTGGGGGTCCAAAATTCACTCATGGAAATATCAAGTCCTCGAATGTCCTCATCCAAGATAATGAAGCTAGCATTTCTGATTTTGGCTTGACACCACTTATGAATGTTCCAGCAGCCCCCTCCAGAGCTGCCGGTTATCGTGCTCCCGAGGTTATTGAGACCCGTAAACACACTCATAAGTCAGATGTGTACAGTTTTGGTGTTCTCCTCCTGGAAATGCTTACTGGGAAGGCACCACTCCAATCACCAGGCCGTGATGACATGGTTGATCTCCCTAGATGGGTGCACTCTGTTGTTAGGGAGGAATGGACGGCCGAGGTTTTCGATGTGGAGCTAATGAGGTTTCAAAACATTGAAGAAGAAATGGTTCAAATGTTGCAGATTGCTATGGCCTGTGTGGCCAAGGTGCCAGATATGCGACCTGGCATGGATGATGTAGTGAGAATGATTGAAGAAATCCGGCAATCTGACTCAGAGAACCGGCCGTCTTCCGAAGAGAATAAATCCAAGGACTCCAACGTTCAAACTCCATAG 1905 0.4493 MKFYSPSLQPILLVIGILFPLAIADLNSEKQALLSFANAIPHRRNLKWDPSSSVCKSWVGITCNPDGTHVVSVRLPGVGLVGSIPSDTLGKLDHLKTISLRSNLLSGNLPTDITSLPSLQYLYLQHNNLSGDIPTSFSPQLNALDLSYNSFTGVIPETFQNLTELNRLYLQNNSLSGQIPNLNVSNLKLLNLSYNQLNGSIPKALQKFPNSSFEGNSLLCGQPLKPCSSVPPTPSPALPPAAPLAPKRQSSKNKLSKVAIIAIAVGGAVLLLLIALVIVLCCLKKKNDGRSSVNKGKGPSVGRGEKPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMETVGRVGQHPNVVPLRAYYYSKDEKLLVYDYIPGGNLSTLLHGSRSGGRAPLDWDSRLKVSLGAARGIAHMHSVGGPKFTHGNIKSSNVLIQDNEASISDFGLTPLMNVPAAPSRAAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVHSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIAMACVAKVPDMRPGMDDVVRMIEEIRQSDSENRPSSEENKSKDSNVQTP 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1250 634 Gene3D Transferase(Phosphotransferase) domain 1 416 633 - -
Mibi05g1250 634 Pfam Protein kinase domain 343 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1250 634 SUPERFAMILY Protein kinase-like (PK-like) 344 617 IPR011009 -
Mibi05g1250 634 ProSitePatterns Protein kinases ATP-binding region signature. 346 377 IPR017441 GO:0005524
Mibi05g1250 634 FunFam pollen receptor-like kinase 1 308 415 - -
Mibi05g1250 634 FunFam Leucine-rich repeat receptor-like protein kinase 28 138 - -
Mibi05g1250 634 Gene3D Ribonuclease Inhibitor 183 228 IPR032675 -
Mibi05g1250 634 SUPERFAMILY L domain-like 30 227 - -
Mibi05g1250 634 Pfam Leucine rich repeat 82 129 IPR001611 GO:0005515
Mibi05g1250 634 Pfam Leucine rich repeat 136 175 IPR001611 GO:0005515
Mibi05g1250 634 MobiDBLite consensus disorder prediction 229 243 - -
Mibi05g1250 634 MobiDBLite consensus disorder prediction 609 634 - -
Mibi05g1250 634 CDD STKc_IRAK 346 610 - -
Mibi05g1250 634 MobiDBLite consensus disorder prediction 229 248 - -
Mibi05g1250 634 ProSiteProfiles Protein kinase domain profile. 340 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1250 634 PANTHER OS05G0588300 PROTEIN 12 622 - -
Mibi05g1250 634 MobiDBLite consensus disorder prediction 609 625 - -
Mibi05g1250 634 Pfam Leucine Rich Repeat 186 208 IPR001611 GO:0005515
Mibi05g1250 634 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Mibi05g1250 634 FunFam Leucine-rich repeat receptor-like protein kinase 139 227 - -
Mibi05g1250 634 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 416 622 - -
Mibi05g1250 634 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Mibi05g1250 634 Gene3D Phosphorylase Kinase; domain 1 308 415 - -
Mibi05g1250 634 MobiDBLite consensus disorder prediction 301 315 - -
Mibi05g1250 634 MobiDBLite consensus disorder prediction 289 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1250 Mibi-ChrMibi05 15058228 15060908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1250 3 632 Receptor kinase-like Gene Family AT5G58300 69.859 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi05g1250 Pkinase 4.9e-36 CL0016