Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1242 ATGCACTGCCTCATTTTCATCGACCCCCACCAACCCCGCTTACCTACCCCGAGGGGGAAATCGTCTCCCGCTCACAAGCGCAATCTCTCCTTCAACGCTACTAGCTTGGCTCCCCCCACATTCCCACCTAACGTGTACCACTTCACCACCACCTCACCTACACCTACTTCCTTCCCCTATAAAACTCATGACCCCCCATCCAATTTCTCAACCAACCCATTATTTTTGAAATATTATACTCTCACACATCATCATTCACCACCACCACCACAATCTTTGGTACAACTTTCCCTCACCTACTACCAACTCATGGATCTCCTCCTCCTGGAGAAGACCCTCCTCGGCCTCTTCGCCGCCGTCGTCGTCGCCATTGTCGTCTCCAAGCTCCGAGGGAGACGCTTCAAGCTACCGCCTGGTCCCCTCCCTGTTCCAATCTTCGGAAATTGGCTCCAGGTCGGTGACGACCTTAACCACCGCAACTTAACCGATTTGGCCAAGAAGTATGGAGACATCTTTATGCTCCGTATGGGGCAAAGAAACCTCGTAGTGGTTTCCTCACCAGAATTAGCAAAAGACGTTCTTCACACGCAAGGTGTGGAGTTCGGGTCTCGGACAAGAAACGTTGTTTTCGATATTTTCACAGGAAAGGGTCAGGATATGGTGTTTACGGTGTACGGAGAGCACTGGAGGAAGATGAGGAGGATCATGACGGTGCCGTTTTTTACGAACAAGGTGGTTCAACAGTACAGGGAGGGGTGGGAGAAAGAGGCGGAGAGCGTTGTGGAGGATGTGAAGAAGAATCCGGAAGCGGCGACTAATGGGATTGTTTTGAGGAAGCGGTTGCAGAGGTTGATGTACAACAATATGTACCGGATTATGTTCGATAGGAGGTTCGATAGCGACGATGATCCACTTTTCCAGAAGCTTAAGACTCTTAATGGAGAGAGGAGTCGTTTGGCTCAGAGCTTTGAGTATAATTATGGTGATTTTATTCCAATTCTTAGGCCTTTCTTGCGAGGGTACTTGAAAATCTGTAAGGAAGTTAAGGAGACGAGGCTGAAATTGTTCAAGGACTACTTCGTCGATGAGAGGAAGAATTTGGGAAGCACTAGGAGTTCGACTAATGGGGAATTGAAATGTGCGATTGACCACATCTTGGATGCTCAGAACAAGGGAGAGATCAACGAGGACAATGTTCTCTACATAGTCGAGAACATTAACGTGGCCGCAATTGAGACGACCCTTTGGTCAATTGAGTGGGGCATCGCCGAGCTGGTGAACCACCCTGAGATTCAGAAGAAGCTCAGGGATGAGATCGACACCGTCCTCGGACCCGGCCACCAGGTGACGGAGCCAGACACCCACAAGCTTCCATACCTACAAGCAGTGATCAAGGAAACCCTTCGCCTGAGAATGGCCATTCCACTTCTTGTCCCCCACATGAACCTCCACGAGGCCAAGCTAGGCGGCTATGACATCCCAGCTGAGAGCAAGATCCTAGTCAACGCGTGGTGGCTCGCCAACAACCCGGCTAACTGGAAGAACCCGGAGCAATTCCGACCGGAGAGGTTTCTTGAGGAGGAAGCAAAGGTTGAGGCCAATGGTAATGACTTTAGGTACCTTCCTTTTGGTGTTGGTAGGAGGAGCTGCCCTGGAATTATACTTGCTCTGCCAATCCTGGGGATTACTTTGGGACGTTTGGTTCAGAACTTTGAGCTTTTGCCTCCTCCTGGACAATCCAAGCTTGATACTACCGAGAAAGGAGGCCAGTTTAGTTTGCATATATTGAAGCATTCTACCATTGTTGCCAAGCCAAGGTCTTTCTAG 1827 0.4986 MHCLIFIDPHQPRLPTPRGKSSPAHKRNLSFNATSLAPPTFPPNVYHFTTTSPTPTSFPYKTHDPPSNFSTNPLFLKYYTLTHHHSPPPPQSLVQLSLTYYQLMDLLLLEKTLLGLFAAVVVAIVVSKLRGRRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKYGDIFMLRMGQRNLVVVSSPELAKDVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYREGWEKEAESVVEDVKKNPEAATNGIVLRKRLQRLMYNNMYRIMFDRRFDSDDDPLFQKLKTLNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKETRLKLFKDYFVDERKNLGSTRSSTNGELKCAIDHILDAQNKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDEIDTVLGPGHQVTEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHEAKLGGYDIPAESKILVNAWWLANNPANWKNPEQFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLDTTEKGGQFSLHILKHSTIVAKPRSF 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1242 608 FunFam Trans-cinnamate 4-monooxygenase 126 600 - -
Mibi05g1242 608 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 104 607 - -
Mibi05g1242 608 Gene3D Cytochrome P450 123 600 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 543 552 IPR017972 GO:0005506|GO:0016705
Mibi05g1242 608 PRINTS E-class P450 group I signature 502 526 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 PRINTS E-class P450 group I signature 540 550 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 PRINTS E-class P450 group I signature 398 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 PRINTS E-class P450 group I signature 418 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 PRINTS E-class P450 group I signature 550 573 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 PRINTS E-class P450 group I signature 165 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 PRINTS E-class P450 group I signature 189 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 PRINTS E-class P450 group I signature 461 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 PRINTS E-class P450 group I signature 284 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 SUPERFAMILY Cytochrome P450 137 606 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 MobiDBLite consensus disorder prediction 7 26 - -
Mibi05g1242 608 Pfam Cytochrome P450 137 598 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 PRINTS P450 superfamily signature 541 550 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mibi05g1242 608 PRINTS P450 superfamily signature 409 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1242 Mibi-ChrMibi05 14956595 14961495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1242 104 607 Monolignol Biosynthesis Gene Families AT2G30490 83.730 0.0 876