Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1239 ATGAATCTTTGTGACGATGGGTTAGCTTATAGGGTATTTTGTGGTTCTGAGAGTGATTTGGTTCTCAAATTTATGGGGTCCGAAGTTTGTGCTGGTGTTTCTGGTGGGTCCACAACTGCTCATGAATGGAAGAAGGGGTGGCCTCTTCCATATGGTGGATTTGCTCAGTATTGTAACAACTGCGGATCTGCCGATGAGGCACTCATTTTCTGTAGTAAATTTCATCGTGAAGAAACTGGTTGGAGGGATTGCGGCTTTTGCAACAAGCCTATCCACAGTGGATGTATAGTATCTAGGCATTTGTTCGACTACCTTGACTTTGGAGGTATAGGCTGCATCAACTGTATAAAGGCTTCTCGCTCGCATCTGAACACTAAAGAATCTAATGGGGCTATTATATCTGCCACGACAAATGCAAGTGCTTGTCATCCTCATCTTATTGGTGGAAAACTGTGGGTGGATTGTGTTAATGAAGGAAAGCTTATGCAATCATGCAGAGTTGTTGAAGCGAGTGAGACTAATGGTCATCATCACCCTCAAAGAGATAAAATCATTTCATGTAGTGGGTTAAAGAACCAAGATATTAAGTGTCGAACAAGGGACATGGGTTCAGGATTTTCAAATATGATTGCAACATCTATTCAGTCATTAAAATTTCCTTTATTAGAAAATAATAGGCCAACATGGGAGAATAAAAATATGCATGAACCACTCACACAACCATCTTTGAGTATGTCCCTGGGGATTCCATTAGGAAACTCTGCCCTTGCTTCTGCTGGTGAGATTGCAGACGATAGGCTTGAGGTCAAACCATCTTCTATGTTTCATCAAGGGCAAAGTTCTCACCCTGTGTTCGCTAAACCATCAAAGACTGGTCTTACCATGAACATAGAAATAAATAAAGAAATAAATAAAGAAATGAATTCTATTTCTCAGGCACGTGTTGCCCGGCCACCTGCTGAAGGAAGGGGCAAGAGTCAGCTACTCCCTCGGTACTGGCCTAGAATTACTGATGAAGAGCTGGAGCAATTGTCTGGAAATCTGAAATCCACTGTAGTGCCATTATTTGAGAAGGTGCTAAGTGCCAGTGATGCAGGTCGAATTGGGCGCCTTGTCCTTCCAAAAACTTGTGCTGAAGTAATTCTAGGATTTTATTTGATGCCTTATTTTCCTTCTGCTTTATTTATTTCAGATCATATATTTTCTTTTCCAACAAACTACTTTTTACCATGTAATTTCAATGCACCTAACAAGCTAGCATATGAGTTGCAGGCCTTTTTCCCTCCAATTTCTCAATCAGAAGGTCTTCCTTTGGACGTGCAAGATGTGAAGGGGAATGAATGGACCTTTCAGTTCAGATTTTGGCCCAATAATAACAGTAGGATGTATGTATTAGAGGGTGTGACCCCTTGCATACAGGGAATGCAACTGGTTGCGGGTGATACTGTGACATTTAGTAGGATAGATCCTGGGGGCAGACTTATTATGGGTTTCAGAAAGACATCAATTTCTTTGGAAACACAGGTTGGGAAAGAGTTCCCACTTTATTATGCCCTGGATGCATCTACTTCTGCACATTCTAATGGGATTACAATAAGGGAAACAACCGTTTGTGATGCAACTGAGAACACGCCCTCTGGAAGTGGTTATTCTGGTCTTCTTCAATCTATGGAAGGGAACGGGGAGCCTCACTTGAACAAACAACCTGAACACCTGCATTTGGGTAGCAGGATAGCTGATTTTCCTCAAATGGAAAATTATGGCCAGATGACAAAAAATGATTCAACGCAGCAATCAATTTCAGTTTCAGAGAAGAAAAGGGCTCGGAATATTGGGCCTAAGAGTAAGAGGTTGCTCATTCATTGTGAAGATGCTTTGGAGTTGAGGCTAACGTGGGAGGAAGCACAAGATTTACTTCGTCCACCACCCAGTGTTGAGCCAATCATTATCACAATTGAGGACCAAATTTTTGAGGAGTACAATGAACCTCCAGTTTTTGGGAAGAGAACTATATTCAGTGCCTGCCCATCTGGGTCCTCATGTTCTAAACCGGAGGAGTTAGGACTGAAGGAATTGGAAGATCTTTTGAAATCCAACAGAGGTATGATCATAGTATATGTTCTCCACCCCAGCTCCGCACTTGTTATGTTCGGAACAGGCTTCAAAGCTAGCCTTGCAGTCCAAGGGATTGAATGCTCCTAA 2202 0.421 MNLCDDGLAYRVFCGSESDLVLKFMGSEVCAGVSGGSTTAHEWKKGWPLPYGGFAQYCNNCGSADEALIFCSKFHREETGWRDCGFCNKPIHSGCIVSRHLFDYLDFGGIGCINCIKASRSHLNTKESNGAIISATTNASACHPHLIGGKLWVDCVNEGKLMQSCRVVEASETNGHHHPQRDKIISCSGLKNQDIKCRTRDMGSGFSNMIATSIQSLKFPLLENNRPTWENKNMHEPLTQPSLSMSLGIPLGNSALASAGEIADDRLEVKPSSMFHQGQSSHPVFAKPSKTGLTMNIEINKEINKEMNSISQARVARPPAEGRGKSQLLPRYWPRITDEELEQLSGNLKSTVVPLFEKVLSASDAGRIGRLVLPKTCAEVILGFYLMPYFPSALFISDHIFSFPTNYFLPCNFNAPNKLAYELQAFFPPISQSEGLPLDVQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQGMQLVAGDTVTFSRIDPGGRLIMGFRKTSISLETQVGKEFPLYYALDASTSAHSNGITIRETTVCDATENTPSGSGYSGLLQSMEGNGEPHLNKQPEHLHLGSRIADFPQMENYGQMTKNDSTQQSISVSEKKRARNIGPKSKRLLIHCEDALELRLTWEEAQDLLRPPPSVEPIIITIEDQIFEEYNEPPVFGKRTIFSACPSGSSCSKPEELGLKELEDLLKSNRGMIIVYVLHPSSALVMFGTGFKASLAVQGIECS 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1239 733 Pfam B3 DNA binding domain 356 500 IPR003340 GO:0003677
Mibi05g1239 733 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 424 683 - -
Mibi05g1239 733 SUPERFAMILY DNA-binding pseudobarrel domain 425 502 IPR015300 -
Mibi05g1239 733 SMART B3_2 356 501 IPR003340 GO:0003677
Mibi05g1239 733 CDD B3_DNA 354 500 IPR003340 GO:0003677
Mibi05g1239 733 Gene3D - 334 392 IPR015300 -
Mibi05g1239 733 Gene3D - 411 504 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1239 Mibi-ChrMibi05 14921190 14926932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1239 25 700 B3 DNA Binding Superfamily AT2G30470 39.833 5.54e-144 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi05g1239 B3 3.9e-10 CL0405