Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1223 ATGCAAGATCCACCTTCAAACCCTAATCCCAATCCCAATGCCGCCTCTCAATTCCCTCCACCGCCGCCCGCCGTGACGGCGGCGACTCCTCCCGCCGCCGCCGCACCCTCGTCTTCCTCGCTCTTCATGAGGGGAGGAGGAGCTGCCGCCGGTGGGTCCCACACACTGCACCACCACAGGAGGGCCCACTCTGAGGTGAACTTCCGGCTGCCGGATGATATGATGGATCTGTCGCCGTCGGATCCGTTCAATGGAGGCTCATCGACGGCTAGCCTTGAGGAGATCGGATCGGAGGATGACCTCTTCTCCACTTACATTGATGTTGACAAACTCGGATCGGCGAGTGGTGGCAATGGATCATCAGATCAGAATGGGAATGGCAATGGCAATGTGAATCACAATGAAAGCGAGAAGAGTCCTAGTGCTAGGCCTAGACATAGGCATAGTAGCTCCGTTGATGGCTCCACCACTTCTACAAGTATGTTTGGAGAGATTATGGAGGCCAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAACTCTGGACCATTGATCCCAAGCGTGCCAAGAGAATCCTAGCAAATCGACAATCTGCTGCTCGTTCAAAAGAGAGGAAAGCTCGTTATATTCAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCCACAACTCTTTCTGCTCAACTTACACTGTACCAGAGGGACACAACAGGTCTGAGCTCAGAAAATACAGAGCTTAAGCTTCGCTTGCAAGCCATGGAGCAACAGGCACAGCTTCGAGATGCTCTAAATGAAGCATTGAAGAAGGAAGTTGAGAGACTAAAGATTGCAACTGGGGAGATGATGAGCCCTTCCGAATCGTTTAATCTGGGAATGCACCAGATGCAATTTACAGCTTCAAACTTCTTTCCACTTCCACCTCAGTCGGGGCCTCCTGGCCACCAGAACATGCAGTTGCCGCCCTTCAATCACTCGTCTAGTATGCCAACCCATCCACATCAACTGCAACAAATAAACTCTCATTCGTTCTCAGAAATGATGCAGAATGACCAACTTGGTCGTTTTCAGGGGCTTGACATTAGTAGTAAAGGACCAGCCCTTGTGAAGTCTGAAGGCCCCTCACTTTCTGCAAGTGAGAGTAGCACAACATTTTAA 1158 0.5069 MQDPPSNPNPNPNAASQFPPPPPAVTAATPPAAAAPSSSSLFMRGGGAAAGGSHTLHHHRRAHSEVNFRLPDDMMDLSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVDKLGSASGGNGSSDQNGNGNGNVNHNESEKSPSARPRHRHSSSVDGSTTSTSMFGEIMEAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDALNEALKKEVERLKIATGEMMSPSESFNLGMHQMQFTASNFFPLPPQSGPPGHQNMQLPPFNHSSSMPTHPHQLQQINSHSFSEMMQNDQLGRFQGLDISSKGPALVKSEGPSLSASESSTTF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1223 385 FunFam probable transcription factor PosF21 185 238 - -
Mibi05g1223 385 MobiDBLite consensus disorder prediction 113 159 - -
Mibi05g1223 385 Coils Coil 202 229 - -
Mibi05g1223 385 MobiDBLite consensus disorder prediction 316 336 - -
Mibi05g1223 385 MobiDBLite consensus disorder prediction 310 336 - -
Mibi05g1223 385 MobiDBLite consensus disorder prediction 1 96 - -
Mibi05g1223 385 Gene3D - 185 259 - -
Mibi05g1223 385 MobiDBLite consensus disorder prediction 1 29 - -
Mibi05g1223 385 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 16 349 - -
Mibi05g1223 385 MobiDBLite consensus disorder prediction 364 385 - -
Mibi05g1223 385 MobiDBLite consensus disorder prediction 114 137 - -
Mibi05g1223 385 SUPERFAMILY Leucine zipper domain 186 237 IPR046347 GO:0003700|GO:0006355
Mibi05g1223 385 Pfam bZIP transcription factor 186 244 IPR004827 GO:0003700|GO:0006355
Mibi05g1223 385 CDD bZIP_plant_RF2 187 236 IPR044759 GO:0003700|GO:0006355
Mibi05g1223 385 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 247 IPR004827 GO:0003700|GO:0006355
Mibi05g1223 385 Coils Coil 250 281 - -
Mibi05g1223 385 SMART brlzneu 182 246 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1223 Mibi-ChrMibi05 14578841 14581150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1223 1 385 bZIP Transcription Factor Family AT2G40620 51.174 1.33e-110 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi05g1223 bZIP_1 3.1e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1223 05 14578841 14581150 Mibi05g1223 05 14578841 14581150 ECH