Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1216 ATGGGTAATCACAGGTTCAAATTGTCAGATATGATACCAAATGCTTGGTTTTACAAGCTCAAAGACATGAGCAGATCAAGGAAGCAGAAAGGTTCTCATGCTACTGTGAAGAACAAAGCAAGCTCACCAGTAATGTCCCAGAGGTCGCCACCAAATTATTTGCATTATTTCCCCACAGAACCTTACAGAGCTGGTATGCTTTTTAACTCACCAATTCAAACCAAAGTCACAGACTTTTCATTCACTGATTCACCAAGAAAGTCATCCAAGAGAAGAGTTCAGAGGAAAACTATTTACAAGCCTTCTCCCTCAGTTCTGTCTTCTGTCTCAACCTCTTGCAGCTGCCATTGGACCCAGCCAAATCAAGCCGAGTCTCCAGATTTCTATGCCTCTTCCATTGAGAGTTCTTCCTCTGAATTAGACCTCTATGAATGTATTACATCTGATTCTGATGAGTGTGATATCTCAGAAGCTCCTCACATGGTCAATGGACCATCCCCTGATTGTAGTTGCAGGGTTAGTTCTTCCACTAATGACATCATCATCGACATGAACCACGAACCGTTTGCTATGAATCCAGAAAAGCTAGACGGGTTTGATGCGATTTCGGAACTAGGCCTTCCTCCTATACTGACAAAACCAGTGAAGTTTGATGGTCAGGCCATTGATGCACCTTATTTGAAATGTTCATCTAAGTTGGAGGAAAGCAGCAGAACTACAACTCCAAAGTCATCTTCTAATTCAAGAGGAATAAAACTTAGAGTCAATTCTGCAAAACTTGCAAGTAGGAAAGTTCAAGCATGTGCAAGAAGGAGTGTGTCATCATCGTCATCATCAAGTGCATGCAAGGTTTCAAGGAAAACGGGGTTTCCAGATGGTGTTGCAGTTGTCAAGTCCTCAATTGATCCACAAAGAGATTTCAAGGATTCAATGGTGGAGATGATCAGGGAGAACAATATTTGGTCATCAGAAGAATTAGAGGATCTTCTAGCCTGCTATCTCTCACTTAACTCAAGAGAATATCACCAACTCATAATCAAAGCATTTGAACAAACTTGGTTTGACTTGGCTCAACTCAGAATGTAA 1086 0.4134 MGNHRFKLSDMIPNAWFYKLKDMSRSRKQKGSHATVKNKASSPVMSQRSPPNYLHYFPTEPYRAGMLFNSPIQTKVTDFSFTDSPRKSSKRRVQRKTIYKPSPSVLSSVSTSCSCHWTQPNQAESPDFYASSIESSSSELDLYECITSDSDECDISEAPHMVNGPSPDCSCRVSSSTNDIIIDMNHEPFAMNPEKLDGFDAISELGLPPILTKPVKFDGQAIDAPYLKCSSKLEESSRTTTPKSSSNSRGIKLRVNSAKLASRKVQACARRSVSSSSSSSACKVSRKTGFPDGVAVVKSSIDPQRDFKDSMVEMIRENNIWSSEELEDLLACYLSLNSREYHQLIIKAFEQTWFDLAQLRM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1216 361 Pfam Transcriptional repressor, ovate 300 356 IPR006458 -
Mibi05g1216 361 ProSiteProfiles OVATE domain profile. 296 355 IPR006458 -
Mibi05g1216 361 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 112 357 IPR038933 GO:0045892
Mibi05g1216 361 MobiDBLite consensus disorder prediction 35 51 - -
Mibi05g1216 361 Pfam DNA-binding domain 1 42 IPR025830 GO:0003677
Mibi05g1216 361 MobiDBLite consensus disorder prediction 79 99 - -
Mibi05g1216 361 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 294 357 IPR006458 -
Mibi05g1216 361 MobiDBLite consensus disorder prediction 27 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1216 Mibi-ChrMibi05 14522635 14523720 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mibi05g1216 Ovate 4e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1216 05 14522635 14523720 Mibi08g0722 08 15182374 15183528 CCT
Mibi05g1216 05 14522635 14523720 Mibi05g1216 05 14522635 14523720 ECH