Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1213 ATGCCAGAGATCGAAAGCTTGCCGGAGAACCACAACGCCTTGTTCGGAAAATACGAGCTCGGAAGAGTTCTCGGCTGTGGTGCCTTCGCGAAGGTCTATTTCGCCCGTAATGTCCAGAACGGTCACAGCGTCGCCATTAAAGTCATCAGCAAGAAGAAGATATGTGGCTCCGGCCTTATGGCTAACATCAAGCGTGAAATTACCATCATGAGTCGATTAAATCACCCAAATATCGTCAAGCTCCATGAGGTTTTGGCCACCAAAACTAAGATCTACTTCGTCATGGAATTCGTCAAGGGCGGTGAATTATTCGCCAAGATCTCTAAAGGACGATTCAGCGAGGATCTCAGCCGTAGGTATTTCCAGCAATTGATCTCCGCCGTTGGTTACTGCCACTCTCGCGGCGTTTTCCACCGTGATTTGAAACCTGAGAATATCTTGATCGACGAGAATGGAAACCTAAAGGTATCGGACTTCGGACTCAGTGCTGTGAAAGACCAGATCCGTCCGGATGGTATGCTACACACGCTTTGTGGAACGCCGGCTTACGTGGCACCGGAGATTCTGGCGAAGCAAGGATACGACGGAGCGAAGGTGGATGTGTGGTCCTGTGGTGTTATTCTCTTTGTATTGACCGCCGGATACCTACCATTCAACGATCCGAACCTTATTGCTATGTATAAGAAGATTTACAAAGGTGAATATCGATGTCCACGGTGGATGTCGCCGGATCTGCGGAGATTTCTTTCTCGGCTTTTGAATACGAATCCGGAGAAACGGATTACGATTGACGAGATTCTACAGGATCCGTGGTTCAGGAAAGGTTATAAGGAGGTTAAATTTCACGAGGAACATAAGTCCGGTGAGGAGGAGAAGATGGCTGATTTGAATGCTTTTGATATAATCTCGTTTTCCTCTGGTTTGAATCTGTGTGGTTTGTTTGATGATCCGATGAATGCGATGGAGGAAACTGAGAGGTTTTTTTTGGAGGCGTCGCCGGAGAAGATGATGGAGAGAATGGAGGAGATTGCTAAGGTGGAGGAGAATCTTGCGGTGAGGAAGAAGAAGGAATTTGGGATGGAGATGGAGGGGCTTAAAGGTAATTTTGCGATTACTGTTGTGTTTTATCGGTTAATGGAAAGGCTGGTTTTAGTGGAGGCACAAATAAGAGGCAGAGATGGTGCCAACTTCTGGGAGAACAAGGTTAGGCCTCAGCTTTGTGCTTCTACAGGTCAAGGAACAAATTCCCAGGTTGCGGGTAATTGA 1266 0.4716 MPEIESLPENHNALFGKYELGRVLGCGAFAKVYFARNVQNGHSVAIKVISKKKICGSGLMANIKREITIMSRLNHPNIVKLHEVLATKTKIYFVMEFVKGGELFAKISKGRFSEDLSRRYFQQLISAVGYCHSRGVFHRDLKPENILIDENGNLKVSDFGLSAVKDQIRPDGMLHTLCGTPAYVAPEILAKQGYDGAKVDVWSCGVILFVLTAGYLPFNDPNLIAMYKKIYKGEYRCPRWMSPDLRRFLSRLLNTNPEKRITIDEILQDPWFRKGYKEVKFHEEHKSGEEEKMADLNAFDIISFSSGLNLCGLFDDPMNAMEETERFFLEASPEKMMERMEEIAKVEENLAVRKKKEFGMEMEGLKGNFAITVVFYRLMERLVLVEAQIRGRDGANFWENKVRPQLCASTGQGTNSQVAGN 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1213 421 FunFam Non-specific serine/threonine protein kinase 8 297 - -
Mibi05g1213 421 ProSiteProfiles NAF domain profile. 291 315 IPR018451 GO:0007165
Mibi05g1213 421 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Mibi05g1213 421 Gene3D Kinase associated domain 1, KA1 292 409 - -
Mibi05g1213 421 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1213 421 Gene3D Transferase(Phosphotransferase) domain 1 98 279 - -
Mibi05g1213 421 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 388 - -
Mibi05g1213 421 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Mibi05g1213 421 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1213 421 CDD CIPK_C 297 407 - -
Mibi05g1213 421 Coils Coil 337 357 - -
Mibi05g1213 421 SUPERFAMILY Protein kinase-like (PK-like) 13 280 IPR011009 -
Mibi05g1213 421 Pfam NAF domain 295 354 IPR004041 GO:0007165
Mibi05g1213 421 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1213 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Mibi05g1213 421 Gene3D Phosphorylase Kinase; domain 1 8 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1213 Mibi-ChrMibi05 14465719 14466984 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1213 1 419 CBL-interacting serine-threonine protein kinases AT2G30360 65.057 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi05g1213 Pkinase 4.1e-74 CL0016