Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1207 ATGTCTGAGATTTTCTTGCACAAAATTAATCCTTCCCCACCTGCTCGTGTTTGCCTAAGAGAAAGTCCTTCCTCCTACAGATCAACACAATCAAGAGGTATGCTTGGATGTCCAGAAACAGAAAGATCAGAAGAGATAGGAAAGAACATAGGAGAGGCAGCAGCATCAGCAGCTTCTTGTCCCATGGGAATAAGGACGAATTTCTATGGAGCAGCAGCTTCTTCAGGGACGACAACCTTAAACACTGTCACCCCCTGTGCTGCATGTAAGCTTCTGAGAAGAAGATGTGCTGAGGAATGCCCTTTCTCTCCTTACTTCTCACCCCATGAGCCTCAGAAATTCGCTGCTGTTCATAAAGTGTTCGGTGCAAGCAATGTCTCCAAGATGCTAATGGAGGTGGCAGAGAGTCAAAGAGCAGATGCTGCAAATAGTCTGGTTTATGAAGCAAACTTGCGGATGAGGGATCCAGTTTATGGATGCATGGGTGCAATATCAACTTTGCAGCAACAAGTTCAGGCATTACAAGCAGAGTTAAATGCTGTGAGAGGTGAGATTCTGAAGTATAAGTATAGAGAAGCAGCTAGTCAGATGATTTCTTCTCATCACCATGGGGCTTTGGTATCTTCTGTGGAAGAACCTAATAATATTTCTGCAGAATCACAACAAGGTCAGCTTGGTCAACGTCATCCTCCAAAACCACCAATTTCTTCATTACCTACGTCTGCTTCTGTTGTTATTTCATCCTTGTCTTCTTCTTCCAGTTCTTCTGTGTACACACCCCCTAATAGCACTATCAGCCATGGATCTATCTCCAGTGATAATGTCCCTTACTTTGTTTGA 840 0.4381 MSEIFLHKINPSPPARVCLRESPSSYRSTQSRGMLGCPETERSEEIGKNIGEAAASAASCPMGIRTNFYGAAASSGTTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVAESQRADAANSLVYEANLRMRDPVYGCMGAISTLQQQVQALQAELNAVRGEILKYKYREAASQMISSHHHGALVSSVEEPNNISAESQQGQLGQRHPPKPPISSLPTSASVVISSLSSSSSSSVYTPPNSTISHGSISSDNVPYFV 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1207 279 ProSiteProfiles LOB domain profile. 84 185 IPR004883 -
Mibi05g1207 279 Coils Coil 164 184 - -
Mibi05g1207 279 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 81 220 - -
Mibi05g1207 279 Pfam Lateral organ boundaries (LOB) domain 85 181 IPR004883 -
Mibi05g1207 279 MobiDBLite consensus disorder prediction 214 279 - -
Mibi05g1207 279 MobiDBLite consensus disorder prediction 238 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1207 Mibi-ChrMibi05 14417358 14418972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1207 62 195 AS2 family AT2G30340 77.612 2.07e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi05g1207 LOB 3e-40 No_clan