Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1187 ATGGCATCTTCTTCAGGTAGCCTTGACACTTCTGGTAACTCTCACCCCACCTTCACTTTCTCTGCACATCCATTCATGAACACTTCTTTCTCTGACCTCCTTGCTTCTCCTGTCGCCGCCTCCGATAACCCTGCCTCCGCCGCCGACAAGAATCGAGGATTGTCGGATCGTATAGCAGAGAGAAGCGGGTTGGGTGTGCCTAAATTCAAGTCTTTACCACCTCCTTCTCTTCCTCTCTCTCCTCCTGCCATTTCTCCTTCTTCTTACTTCTCCATACCTGCTGGTCTGAGCCCTGCGGAGCTTCTTGATTCCCCTGTTCTCCTTAATGCTTCTCACATTTTGCCATCTCCGACAACTGGAGCATTCTCTGCTCAGGCCTACAATTGGAAGACCAGTTCTGGGCAAAACCAGCAAAATATCAAAGAAGAAGACAAGAACTTCTCAGGTTTCTCGTTTCAAACCCAACCCAGACCTCCTCTTCCATCCACATCAATGTTTCAAACTTCAGCTCCCTCTAATCAAACTGCATGGAGTTTTCAAGAACCCACGAAGCAGGACAACTTTTCTTCAGGAAAGAATATGGTGAAACCCGAGAACGCTTCAACACAGGGCTATTCCACTGAGATGGTTGTTAGTAATAATGTCCAAGCAAACCATAATAGTGGGTTTCAATCGGATCATAGCAATTACCACCCACAAGTACAAACTCAGACCTTAAGTAGAAGATCAGATGATGGGTACAACTGGAGAAAATATGGGCAGAAGACTGTGAAAGGAAGTGAGAATCCTAGAAGCTATTACAAATGCACATACCCCAATTGCCCAACAAAAAAGAAGGTTGAGAGGTCTGTGGATGGGCAAATTACTGAGATTGTTTATAAGGGGACACATAACCATCCAAAGCCTCAGGCAACTAGGAGGAACTCCTCAAATAATTCATCTTCTCTTGCAATTCCTGCTTCAAATTCTGCGTTAGCTGAAATCCAAGATCAGTCATTTGCTAGCCATGGTAATGGACAAATGGATTCAGCTGCAACACCAGAAAACTCATCTATATCGATGGGGGATGATGATTTTGAGCAGACTTCCCAGAGGACTAGATCAGGAGGAGATGAATTTGATGAAGAGGAATCTGATGCCAAAAGATGGAAAGTGGATGGTGAAAGTGAGGGTATATCCGCAGCTGGAAGTAGAACAGTAAGAGAACCCAGAGTTGTAGTCCAGACAACCAGTGACATAGATATTCTAGATGATGGATACAGATGGAGAAAATACGGGCAAAAAGTAGTGAAGGGAAATCCAAATCCAAGGAGTTACTACAAGTGCACACACCCAGGATGTCCAGTGAGGAAGCATGTAGAGAGAGCATCACATGACCTAAGAGCAGTGATCACAACCTACGAAGGAAAACACAACCATGATGTTCCTGCGGCCAGAGGAAGTGGCGGCGGCAGCCATTCTGTGAACAGACCTCTCCTAAGCAATTCCACAAATACTGACAGTGCAATGATGACCACCACTGCCATAAGGCCATCCGCCATCACACACAACAATACTAACAATTCTATTCAGAATTTTAGGTCAGAAGGTCACTCATCATCATCATTGGCCCTAGGGATGCTTCAGGGTCAAGGAAGTTTCGCTTTTTCAGGGTTTGGGAATCAAATGGGGTCTTTCATGAGTCAAAATAACAATAACAACAACAATAATCAGCAATCTGAGAATGGGTTTTCTTCCAGAACCAAGGAGGAGCCAAGGGATGACACGTTTCTTGAATCTCTACTGTGCTGA 1791 0.4489 MASSSGSLDTSGNSHPTFTFSAHPFMNTSFSDLLASPVAASDNPASAADKNRGLSDRIAERSGLGVPKFKSLPPPSLPLSPPAISPSSYFSIPAGLSPAELLDSPVLLNASHILPSPTTGAFSAQAYNWKTSSGQNQQNIKEEDKNFSGFSFQTQPRPPLPSTSMFQTSAPSNQTAWSFQEPTKQDNFSSGKNMVKPENASTQGYSTEMVVSNNVQANHNSGFQSDHSNYHPQVQTQTLSRRSDDGYNWRKYGQKTVKGSENPRSYYKCTYPNCPTKKKVERSVDGQITEIVYKGTHNHPKPQATRRNSSNNSSSLAIPASNSALAEIQDQSFASHGNGQMDSAATPENSSISMGDDDFEQTSQRTRSGGDEFDEEESDAKRWKVDGESEGISAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGGGSHSVNRPLLSNSTNTDSAMMTTTAIRPSAITHNNTNNSIQNFRSEGHSSSSLALGMLQGQGSFAFSGFGNQMGSFMSQNNNNNNNNQQSENGFSSRTKEEPRDDTFLESLLC 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1187 596 MobiDBLite consensus disorder prediction 40 76 - -
Mibi05g1187 596 MobiDBLite consensus disorder prediction 472 499 - -
Mibi05g1187 596 ProSiteProfiles WRKY domain profile. 411 476 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g1187 596 MobiDBLite consensus disorder prediction 558 596 - -
Mibi05g1187 596 FunFam WRKY transcription factor 33 403 469 - -
Mibi05g1187 596 FunFam WRKY transcription factor 232 303 - -
Mibi05g1187 596 MobiDBLite consensus disorder prediction 335 359 - -
Mibi05g1187 596 Gene3D WRKY domain 228 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g1187 596 Pfam WRKY DNA -binding domain 417 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g1187 596 Pfam WRKY DNA -binding domain 244 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g1187 596 MobiDBLite consensus disorder prediction 148 175 - -
Mibi05g1187 596 ProSiteProfiles WRKY domain profile. 244 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g1187 596 SUPERFAMILY WRKY DNA-binding domain 408 476 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g1187 596 MobiDBLite consensus disorder prediction 302 317 - -
Mibi05g1187 596 SUPERFAMILY WRKY DNA-binding domain 240 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g1187 596 MobiDBLite consensus disorder prediction 293 317 - -
Mibi05g1187 596 MobiDBLite consensus disorder prediction 558 578 - -
Mibi05g1187 596 MobiDBLite consensus disorder prediction 335 397 - -
Mibi05g1187 596 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 103 516 IPR044810 GO:0003700
Mibi05g1187 596 MobiDBLite consensus disorder prediction 360 388 - -
Mibi05g1187 596 MobiDBLite consensus disorder prediction 235 262 - -
Mibi05g1187 596 Gene3D WRKY domain 403 469 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g1187 596 SMART WRKY_cls 416 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g1187 596 SMART WRKY_cls 243 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1187 Mibi-ChrMibi05 14230812 14233441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1187 64 524 WRKY Transcription Factor Family AT2G38470 48.852 4.35e-111 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi05g1187 WRKY 1.7e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1187 05 14230812 14233441 Mibi05g1187 05 14230812 14233441 ECH