Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1158 ATGGAATACAATCCAGTGCAAGGAAGAAGCCCAAAGAAAGAGGAGCAACAAGTGCCCGACTATGTCTTCCCCAAATTATTACCAGATTCCTCCACACCTCATTCCAGCCATGATTTCACTATTATGGATGAACTGGGAGATGGTGTTTTATCAGGCTCTGAACACAAGCACACAGAATTATTACAACATCATTGTTATGGTGATGGTCAGCTTATTTGGGACTTCATGGAATTGGAGGGTTTCTCAGCTGTTGATGCAGAGGAAGCAGAAGTAGCAGAAGATGACGATGAAGGAGAGGAGGAGGGGGAGAGAAGCAAATGGCTCGTGGAAAACGACAAGATTATAAAGACAGAAAATAATGGAGGTCTTTGGGAGGAAGATGATGATGAGAAGATAAAATCTCTGAAATTGAACTTGAACTTGAACTATCAAGAGGTTTTGGACGCATGGTCTGACCGTGGTTCTCTCTGGGCCGACGAGTCTTCTCTTTTACTGCATTCCAACAATGGCCTCTGCTATATGGGAGAAGTTCCAATAATGGGGGAAGACAGGAGGAGAAGGAATGCGAGTGTTAGAAGGTACAAAGAGAAGCGTCAGAGCAGATTATTCTCCAAGAAGATAAGATACCAAGTCAGAAAACTAAATGCTGATAAAAGACCTCGACTCAAGGTCGATCTGGTCGCTTTGTGA 690 0.4348 MEYNPVQGRSPKKEEQQVPDYVFPKLLPDSSTPHSSHDFTIMDELGDGVLSGSEHKHTELLQHHCYGDGQLIWDFMELEGFSAVDAEEAEVAEDDDEGEEEGERSKWLVENDKIIKTENNGGLWEEDDDEKIKSLKLNLNLNYQEVLDAWSDRGSLWADESSLLLHSNNGLCYMGEVPIMGEDRRRRNASVRRYKEKRQSRLFSKKIRYQVRKLNADKRPRLKVDLVAL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1158 229 ProSiteProfiles CCT domain profile. 187 229 IPR010402 GO:0005515
Mibi05g1158 229 Pfam CCT motif 187 223 IPR010402 GO:0005515
Mibi05g1158 229 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 64 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1158 Mibi-ChrMibi05 14023000 14023906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1158 120 227 C2C2-CO-like Transcription Factor Family AT1G73870 38.760 2.02e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi05g1158 CCT 1.8e-14 CL0281