Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1141 ATGCTCATCAGTAATCTCATAGTTGCAGTTACTGTTCCTTTCTTTGGATACCTTAGGGCACTTTCAGGATCACTACTTTGTGTCTCCACTTCAATTATAGTTCCATCAGTTTGTTACTTGAAGATTTCTGGAGCTTTAAGGAGATTTAGTTATGATATGATCATTAGTTATTTGATTATAGTAATGGGTATTGTAATTCTAGTGTCACACTCGCAAAGTTGAGATTTCGAACACACACACGCGCGCGCGCTCTTTAGTGACTCAATAATGGAAGAAGGGTTTTTGGTGGTGTTGATGATGATGCTGAGTTTGTTTTCTTCTAGTTTTAGCTTCTCTTCTTCGCCTCTCAACAGTGAAGGTTTGGCTCTGTTGATGTTGAAGAACCGAGTGGTGAGAGACCCATTTGGAGCTTTGTTCAATTGGAATGGATCAGGACATACTGATCACTGTTCATGGTTTGGAGTTGAATGCTCTGTTCACCGCAAAGTCGTTTCCTTGAATTTGAAGGACCTTTGTCTTGAAGGGACACTAGCCCCTGAAATTGGGAAGCTGACTCACATAAAATCTATCATTTTGCGTAACAATTCTCTTTCTGGAGAGATTCCTAAAGAGATATCACAACTGGAGGAACTGGAAGTTCTTGACTTGGCATATAACAACTTTAAAGGATCATTTCCATCCGACCCTGACAGCAATCCATCCCTCACTTCCCTGCACATAGGCCACCATGAGGATGAGCCATACAAGAGGAAACTTCTTCATGGATCAAAAGCTAGGAAACAAAGAGATCATAAGAAAGAATCTTTTTCAACATCACCCTCACCTTTCCTCTCTTCATTACCACCAGATACTGAGCCTTTCTCACCATCAGAACCACCCTCAAATCCACCATCTGCATTAACACCATCATCACATATGCTTCCACCTTTAGGGTCCCCGGATTTTTCCCCTTCACCATCGCCGTCCCCTATTTTTCTCACGCCTTCACTTTCTCCAATGGTGACACCAACCATAAGAATATCATCACCAGCAAATCCACCTACTGTTGCATCCTCTCCAACACAGTCCAATTGGATTTCAGCACCTTCCCCTGCTTCATTTTTGAACCAAGGGACCAAAAAAAATTTCAAGACCCAAAAATCTTTGATCATTTGGTCAACAGCTGGGGGTGTATCCTTACTGGTTTTTGTGTCAGCCATTGTTTTTGCTTGCTTCCGAACTAGCAAGGTTGTAACTGTGAAACCTTGGTCCACGGGCTTAAGTGGACAGCTACAAAAAGCTTTTGTCTCAGGTGTGCCAAATCTCAGACGAGCAGAGGTTCGAGCAGCTTGTGAAGATTTCAGCAACATTATCGGTTCTATACCTGAGGGGACTGTTTATAAGGGGACTCTTTCCAGTGGTGTTGAGATTGCTGTAGTATCTACTGCAGTGACCTCATCTAAATACTGGCCTAAAATTATGGAAGCTCAATTCAGAAGAAAGATAGAGACTTTATCCAGATTGAACCACAAGAACTTTGTGAATCTAATCGGGTATTGTGAAGAGAAGAAGCCATTCACAAGAATGATGGTCTTTGAGTATGCTCCTAATGGAACTCTCTTTGAACATCTACATATAAGAGAAGCAGAGCAACTAGACTGGGGAATGAGAATGAGGATAGCTATGGGAATAGCTTATTGCCTAGAGCATATGCATCAGATGGAACCACCCATTGCCCTCAGAAACCTTCACTCTTCATCTATATACCTCACTGAAGATAATGCTGCTCAAGTATCAGACCTCTGTTTCTGGAATGACATGGCTGCTGCTACAAAGAAAAGTTCTGCAGCCACAAAGCCATCATCAGAAACACCATCAACAGACACAAAGGAAAATGTTTATAGCTTTGGGGCTATACTGTTCGAGTTGATCACAGGGCGAATTCCCTATCCTGTGGAAATTGGCTTTACTTCACAGTACCTAACAATGGGGCAATCCTTGAGAGATATGGTTGATCCAACTCTGAACTCTCTGCCAGCAGAAGAGGCTGAGAAATGGTGGGAATTAATAAAAGAGTGTTTGCATTCAGAACCAGAGAAAAGACCAACTATGAGAGAAGTTGCAGCTAAGTTGAAGGAACTAACTGGAATGGGACCTGATGGAGCAACTCCAAAATCATCACCTCTTTGGTGGGCAGAACTGGAAATCATGTCCACGGATCCTGCCTGA 2208 0.4244 MLISNLIVAVTVPFFGYLRALSGSLLCVSTSIIVPSVCYLKISGALRRFSYDMIISYLIIVMGIVILVSHSQSXDFEHTHARALFSDSIMEEGFLVVLMMMLSLFSSSFSFSSSPLNSEGLALLMLKNRVVRDPFGALFNWNGSGHTDHCSWFGVECSVHRKVVSLNLKDLCLEGTLAPEIGKLTHIKSIILRNNSLSGEIPKEISQLEELEVLDLAYNNFKGSFPSDPDSNPSLTSLHIGHHEDEPYKRKLLHGSKARKQRDHKKESFSTSPSPFLSSLPPDTEPFSPSEPPSNPPSALTPSSHMLPPLGSPDFSPSPSPSPIFLTPSLSPMVTPTIRISSPANPPTVASSPTQSNWISAPSPASFLNQGTKKNFKTQKSLIIWSTAGGVSLLVFVSAIVFACFRTSKVVTVKPWSTGLSGQLQKAFVSGVPNLRRAEVRAACEDFSNIIGSIPEGTVYKGTLSSGVEIAVVSTAVTSSKYWPKIMEAQFRRKIETLSRLNHKNFVNLIGYCEEKKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWGMRMRIAMGIAYCLEHMHQMEPPIALRNLHSSSIYLTEDNAAQVSDLCFWNDMAAATKKSSAATKPSSETPSTDTKENVYSFGAILFELITGRIPYPVEIGFTSQYLTMGQSLRDMVDPTLNSLPAEEAEKWWELIKECLHSEPEKRPTMREVAAKLKELTGMGPDGATPKSSPLWWAELEIMSTDPA 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1141 735 SUPERFAMILY L domain-like 121 242 - -
Mibi05g1141 735 FunFam Leucine-rich repeat receptor-like kinase 121 242 - -
Mibi05g1141 735 MobiDBLite consensus disorder prediction 279 303 - -
Mibi05g1141 735 Pfam Leucine rich repeat N-terminal domain 117 158 IPR013210 -
Mibi05g1141 735 MobiDBLite consensus disorder prediction 327 363 - -
Mibi05g1141 735 Gene3D Phosphorylase Kinase; domain 1 421 527 - -
Mibi05g1141 735 MobiDBLite consensus disorder prediction 225 363 - -
Mibi05g1141 735 ProSiteProfiles Protein kinase domain profile. 445 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1141 735 FunFam Inactive receptor-like serine/threonine-protein kinase 419 527 - -
Mibi05g1141 735 Pfam Protein tyrosine and serine/threonine kinase 449 704 IPR001245 GO:0004672|GO:0006468
Mibi05g1141 735 MobiDBLite consensus disorder prediction 312 326 - -
Mibi05g1141 735 PANTHER PROTEIN MALE DISCOVERER 2 97 732 - -
Mibi05g1141 735 Gene3D Transferase(Phosphotransferase) domain 1 529 710 - -
Mibi05g1141 735 Gene3D Ribonuclease Inhibitor 115 278 IPR032675 -
Mibi05g1141 735 SUPERFAMILY Protein kinase-like (PK-like) 431 704 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1141 Mibi-ChrMibi05 13855539 13863781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1141 431 706 Receptor kinase-like Gene Family AT3G19300 33.221 3.85e-37 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mibi05g1141 PK_Tyr_Ser-Thr 3.9e-26 CL0016