Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1121 ATGGCTTCAACGGCTACTTTTTTCTTGCTCTTCCTGGCCTTAGCCTCATTATTGTGTTGTTGTGTTGAGTCCTTATCAGAGATCGAAGCCCTAACGGCTTTCAGGCTTCGCCTCCACGATCCTCTTGGCTCATTGGACGGTTGGGATCCTTCCACGCCTTCAGCTCCATGTGACTGGCGTGGCATTGTCTGTTACAACAAGCGAGTTCGTGATATTCGCTTGCCTCGTCTTCAACTTTCCGGTCCGCTTTCTGATTCTCTCTCCGGTTTGCTTCAGCTTCGTAAGTTGAGCCTTCATTCTAACAACTTCAATTCCTCCATTCCTCCTTCTCTCTCTCAATGTCTCCTTCTTCGTTCTCTTTACCTTCATAATAACTCCTTCTCTGGTAACCTCCCTCCTTCTCTTCTCAACCTCACCAACCTTCAAATCCTCAATGTCGCTCATAACTTCCTCTCTGGAAGAATCACCGGAGATTTCTCAGATTCTCTCCGGTTTCTTGATTTATCTTCGAACTCATTTTCCGGTGATGTTCCGGCGAATTTTTCCTCGAAATCTCAGTTACGTCTCATCAACTTGTCTTATAATCGGTTTTCTGGTAGAATACCTGGCTCTGTTGGAGTTTTAGGGCAGCTTGAGTATCTTTGGCTTGATTCTAACCAGTTGTACGGGACTTTGCCTTCGGCTTTGGTTAACTGTTCTTCGCTTGTGCATTTTAGCGCCGTGAATAATGCGTTTTCCGGTTTGATTCCGGCGACGATGGGGACTATGCCGAGGCTTCAGGTGCTGTCGTTGTCGTCGAATCAACTTTCGGGAACGGTCCCCACTTCTCTGTTTTGCAATGTCCACTTGGCCAATTCTTCTTCGCTGAGGATCGTTCAATTAGGCTTTAATGCACTCACGGGCATTTCCGAGCCGCCAAATCCAAGGTGTGTTAATAATGTTTTGGAGGTTTTAGAGCTTGAGGAGAATCTTATTCGTTCTGCATTTCCCTCCTGGTTGTTGACTTATGCGACGTCTTTGAGAGCTGTTGATTTTTCCGGGAATCACTTTTCTGGTGTTTTGCCGGCGAGTATTGGTAATTTATTGAACCTAGAGGAGCTAAGGGTGGCGAACAATTCATTGTCTGGTTATGTTCCTCGTGAGATTGTGAAATGTAGTTTGTTACAGGTTCTTGATCTTCGAGGAAACCGATTCTCTGGACTCATTCCTTCATTTCTTGGCCAAATGAGGAACCTCAGAATGTTATCCCTTGGCGATAACCTGTTTACTGGTCCTATACCCACGAGTTTGGGAACACTTTCTGAGCTCGAGTCGTTGAATTTGAGCAATAATAAACTTACAGGGGTTATACCCCCTGAATTAATGCGATTGGGTAACATGAGTACTTTGAATCTCAGCAATAATAAATTTTCAGGCCAACTTCCGTCTGCCATTGGGGAGTTAACAGCTTTGCAGGTTCTGAATTTGAGCCATTGTGGGTTTTCAGGACAGATTCCTGCTAGTGTTGGTGGTTTGATGAAACTAACGGTGCTGGATTTAAGTAGACAAAGTCTTTCAGGTGATTTGCCAATCGAGCTTTTCGGATTACCTAGCCTACAGGTTGTTGCTCTTCAAGAGAATCACTTATCTGGAGCCGTTCCTGAGGGTTTCAGCAGTCTGGTTACTCTACAATATCTTAATATCAGCTCCAATCTCTTTTCTGGTGAGATTCCAGCTACTTATGGATTTCTTCGGTCGTTAATTGTTCTTTCTGCGTCTCAGAATCATATTTCTGGTAGCATACCATCAGAGATTGGTAACTGTTCTCAGCTGGAAGTGCTCGAGCTTCGTTCAAATCATTTGCATGGTACCATTCCCGGCTATATCGACCGTCTTAATCGATTAAGGGTCCTTGATTTAGGGGACAACAAGCTTACAGGAGATATTCCAGAAGAAATATCCGAATGTTCTGCTTTGACTTCGCTGCTATTGGATGCTAATCAACTAACGGGTCAAATACCAGAATCCCTGTCAAATCTATCAAACCTGACTGCCTTAGATCTCTCCTCAAATCAGCTGAGCGGAGCCATTCCGGCCAGCCTGTCACTCATATCTGGTTTGAAGTATTTAAACGTCTCTAAAAATAATCTTGCGGGTGAGATTCCACGAATGCTGGGCTCCAGATTCAATGATCCTTCTATATATGCAATGAATAACAGGTTATGCGGAAAGCCATTACACAGTGAATGTGCAAATGTAAGAAGGCGAAAGAGGAAGAGGCTAATAATTTTTATTGGCGTGGCTATTGGTGGATTATGCCTTTTGGGACTATGCTGCTGTGGATACATTTATAGCCTCTTACGGTGGCGGAAGAAGCTGAGAGAAGGAGTAACAGGGGAGAAGAAGAAGAAAAGCCCTGCTCGTTCAAGTTCAGGAGCAGACAGAGGTAGAGGAAGTGGGGAAAATGGAGGCCCAAAACTAGTAATGTTCAATAACAAGATCACTTATGCTGAGACACTAGAAGCAACAAGACAGTTTGATGAAGAGAATGTGTTGAGCAGAGGAAGATACGGCCTTGTGTTCAAAGCCTCATACCCAGATGGAATGGTACTTTCAATCCGTCGTCTTCCTGATGGATCAATCGAGGAAAGAAGCTTCCGTAAAGAAGCAGAATCATTAGGAAAAGTGAAGCACCGTAATTTAACAGTTTTGCGTGGCTATTACGCAGGGCCACCTGACGTGAGGCTTCTTGTTTATGACTACATGCCCAATGGAAACCTTGGGACTCTTCTTCAAGAAGCATCTCAGCAAGATGGCCATGTACTGAATTGGCCTATGCGTCATCTCATCGCACTGGGCATTGCTCGTGGACTAGCCTTCTTACATTCAGTCTCAATAGTTCATGGCGATGTGAAGCCTCAAAATGTTCTGTTTGATGCTGATTTTGAAGCCCATTTATCAGAATTTGGTTTAGACAGAATCACAATCGCAACCCCAGCAGAAGCATCCTCATCTTCCACTCCCATAGGTTCACTGGGGTACGTATCGCCGGAAGCAGCGTTGACTGGTCAAGCGACCAAGGAAGCTGACGTGTACAGCTTTGGGATAGTATTGTTGGAGATACTTACAGGAAGAAAACCAGTGATGTTCACGCAAGATGAAGACATAGTGAAATGGGTGAAAAGGCAATTGCAAAGAGGTCAGATTTCAGAATTACTTGAACCTGGGTTGCTAGAGCTAGACCCAGAATCATCAGAATGGGAAGAGTTCTTGTTGGGAATCAAAGTGGCTCTTTTATGCACAGCACCAGATCCTCTTGATAGGCCATCAATGGCTGACATTGTTTTCATGCTTGAAGGTTGCCGGGTCGGACCGGAGATTCCATCGTCGGCCGATCCCACCACGTTACCTTCCCCTACTTGA 3402 0.448 MASTATFFLLFLALASLLCCCVESLSEIEALTAFRLRLHDPLGSLDGWDPSTPSAPCDWRGIVCYNKRVRDIRLPRLQLSGPLSDSLSGLLQLRKLSLHSNNFNSSIPPSLSQCLLLRSLYLHNNSFSGNLPPSLLNLTNLQILNVAHNFLSGRITGDFSDSLRFLDLSSNSFSGDVPANFSSKSQLRLINLSYNRFSGRIPGSVGVLGQLEYLWLDSNQLYGTLPSALVNCSSLVHFSAVNNAFSGLIPATMGTMPRLQVLSLSSNQLSGTVPTSLFCNVHLANSSSLRIVQLGFNALTGISEPPNPRCVNNVLEVLELEENLIRSAFPSWLLTYATSLRAVDFSGNHFSGVLPASIGNLLNLEELRVANNSLSGYVPREIVKCSLLQVLDLRGNRFSGLIPSFLGQMRNLRMLSLGDNLFTGPIPTSLGTLSELESLNLSNNKLTGVIPPELMRLGNMSTLNLSNNKFSGQLPSAIGELTALQVLNLSHCGFSGQIPASVGGLMKLTVLDLSRQSLSGDLPIELFGLPSLQVVALQENHLSGAVPEGFSSLVTLQYLNISSNLFSGEIPATYGFLRSLIVLSASQNHISGSIPSEIGNCSQLEVLELRSNHLHGTIPGYIDRLNRLRVLDLGDNKLTGDIPEEISECSALTSLLLDANQLTGQIPESLSNLSNLTALDLSSNQLSGAIPASLSLISGLKYLNVSKNNLAGEIPRMLGSRFNDPSIYAMNNRLCGKPLHSECANVRRRKRKRLIIFIGVAIGGLCLLGLCCCGYIYSLLRWRKKLREGVTGEKKKKSPARSSSGADRGRGSGENGGPKLVMFNNKITYAETLEATRQFDEENVLSRGRYGLVFKASYPDGMVLSIRRLPDGSIEERSFRKEAESLGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVSIVHGDVKPQNVLFDADFEAHLSEFGLDRITIATPAEASSSSTPIGSLGYVSPEAALTGQATKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKRQLQRGQISELLEPGLLELDPESSEWEEFLLGIKVALLCTAPDPLDRPSMADIVFMLEGCRVGPEIPSSADPTTLPSPT 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1121 1133 SUPERFAMILY Protein kinase-like (PK-like) 818 1122 IPR011009 -
Mibi05g1121 1133 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 457 747 - -
Mibi05g1121 1133 Gene3D Ribonuclease Inhibitor 161 246 IPR032675 -
Mibi05g1121 1133 Gene3D Ribonuclease Inhibitor 25 160 IPR032675 -
Mibi05g1121 1133 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Mibi05g1121 1133 SUPERFAMILY L domain-like 22 303 - -
Mibi05g1121 1133 SMART LRR_typ_2 208 232 IPR003591 -
Mibi05g1121 1133 SMART LRR_typ_2 673 696 IPR003591 -
Mibi05g1121 1133 SMART LRR_typ_2 361 385 IPR003591 -
Mibi05g1121 1133 SMART LRR_typ_2 625 649 IPR003591 -
Mibi05g1121 1133 SMART LRR_typ_2 138 161 IPR003591 -
Mibi05g1121 1133 SMART LRR_typ_2 577 601 IPR003591 -
Mibi05g1121 1133 SMART LRR_typ_2 481 505 IPR003591 -
Mibi05g1121 1133 SMART LRR_typ_2 529 552 IPR003591 -
Mibi05g1121 1133 SMART LRR_typ_2 256 280 IPR003591 -
Mibi05g1121 1133 SMART LRR_typ_2 90 114 IPR003591 -
Mibi05g1121 1133 SMART LRR_typ_2 433 457 IPR003591 -
Mibi05g1121 1133 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 915 1119 - -
Mibi05g1121 1133 Pfam Leucine rich repeat 603 662 IPR001611 GO:0005515
Mibi05g1121 1133 Pfam Leucine rich repeat 388 446 IPR001611 GO:0005515
Mibi05g1121 1133 Pfam Leucine rich repeat 507 565 IPR001611 GO:0005515
Mibi05g1121 1133 Gene3D Ribonuclease Inhibitor 385 459 IPR032675 -
Mibi05g1121 1133 PRINTS Leucine-rich repeat signature 436 449 - -
Mibi05g1121 1133 PRINTS Leucine-rich repeat signature 673 686 - -
Mibi05g1121 1133 FunFam Piriformospora indica-insensitive protein 2 354 451 - -
Mibi05g1121 1133 ProSiteProfiles Leucine-rich repeat profile. 435 456 IPR001611 GO:0005515
Mibi05g1121 1133 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 183 - -
Mibi05g1121 1133 PANTHER UNNAMED PRODUCT 315 1044 - -
Mibi05g1121 1133 FunFam Putative LRR receptor-like serine/threonine-protein kinase 802 914 - -
Mibi05g1121 1133 Pfam Leucine Rich repeat 674 688 IPR001611 GO:0005515
Mibi05g1121 1133 Gene3D Transferase(Phosphotransferase) domain 1 915 1119 - -
Mibi05g1121 1133 Gene3D Ribonuclease Inhibitor 247 304 IPR032675 -
Mibi05g1121 1133 Gene3D Ribonuclease Inhibitor 305 384 IPR032675 -
Mibi05g1121 1133 SUPERFAMILY L domain-like 450 744 - -
Mibi05g1121 1133 Gene3D Phosphorylase Kinase; domain 1 815 914 - -
Mibi05g1121 1133 FunFam Leucine-rich repeat receptor protein kinase EMS1 202 305 - -
Mibi05g1121 1133 MobiDBLite consensus disorder prediction 791 819 - -
Mibi05g1121 1133 ProSitePatterns Serine/Threonine protein kinases active-site signature. 959 971 IPR008271 GO:0004672|GO:0006468
Mibi05g1121 1133 SUPERFAMILY RNI-like 224 543 - -
Mibi05g1121 1133 ProSiteProfiles Protein kinase domain profile. 839 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1121 1133 SMART serkin_6 839 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1121 1133 Pfam Protein kinase domain 841 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1121 1133 Gene3D Ribonuclease Inhibitor 460 746 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1121 Mibi-ChrMibi05 13593793 13597194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1121 1 1132 Receptor kinase-like Gene Family AT1G75640 64.820 0.0 1379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Mibi05g1121 Pkinase 5.8e-32 CL0016