Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1117 ATGATCGATGGGGGACGTTTTCCGACCATGGATCTGCTCCGTTCTGAGCCTATGCAGCTTGTTCAGCTCATCATTCCTACCGAATCGGCTTATCGAGCCGTCTCTTACCTTGGCGATCTCGCCCTCTTTCAATTCAAAGATCTTAATGCAGAAAAAAGCCCATTCCAACGGACATATGCTGCTCAGATTAAAAGATGTGGGGAAATGACACGCAAGCTTCGGTTCTTTAAGGAACAAATGGCGAAGGCTGGTGTATCACCTTTGACAAGGTCAATGAGAGATGGAGAAGCTGATCTGGACTACTTAGAGATTAAACTTGCAGAGCTTGAAGCTGAGCTAGTTGAGAATAATGCGAATAATGATAAGTTGCAGCATAGTTACAGTGAGCTATTAGAGTATAAACTCGTTCTGCAGAAGGTTGGCGAGTTTTTCTTCCCAGCACAAAAAAGCGCAGCATCTCAACAGAGAGAAGTTGGAGTTCCGAGCAATTCCAAAGGGTCTATTGACAGCCCATTGCTACAAGAACAAGAGATGACAACGGAAACATCAAAGCCAATGAAACTGGGCTATATCGCAGGCCTCGTTCCAAGAGAAAAATCAATGTCTTTTGAGAGAATTTTATTTCGTGCTACTAGGGGTAACTGCTTTCTGAAGCAAGCCACGATTGAACATCCTGTACTTGATCCTTTGTCAGGAGAGAAGGTTGATAAAAATGTGTTTCTTATCTTTTTTTCTGGAGAAAGAACCCATAGTAAGATTCTAAAAATATGCGATGCCTTTGGAGCAAACCGTTATCCATTCACAGATGACTTGACTAAACAATTTCAGATGATTAAAGAGGTGTCTGGAAGACTTTCTGAATTGAATACTACCGTTGATGCTGGATTGCGGCACAGGAGTACTATATTGCAGACAATTGGATATCACTACGAGACGTGGAGCCTTCTGGTGAAGAAGGCAAAATCCATTTATCACACTTTGAATATGTTCAACATCCATGTGACAAAGAGATGTCTTGTCGCAGAAGGTTGGTGCCCTGTTTTTGCAACAATTCAGATTCAAAGTGCATTGCATCGAGCAAGCATGGACAGTAACTCACAAGTTGGGACTATATTCCAGGTTTTACAAACAAAGGAATCACCACCTACCCATTTGCGGACAAACAAATTTACTTCTGCTTTTCAAGAAATTGTAGATGCTTACGGAATTGCCAAGTACCGAGAGGCAAATCCTGGTGTATTCACAATCATAACATTTCCCTTCCTTTTTGCTGTTATGTTTGGTGATTGGGGGCATGGTATATGTTTATTGCTGGCTACTTTGTATTTCATTATCAGAGAGAGAAAATTTTCAAGTCAGAAACTAGGGGACATCGTAGAAATGACTTTTGGTGGCCGCTATGTAATTATGATGATGGCACTGTTCTCAATCTACACAGGATTTATATACAATGAATTCTTCTCTGTTCCATTTGAACTATTCGGCCCATCTGCCTACGGATGCCATGATCCTTCATGCAGGGATGCTACTACAACAGGTCTGATTAAAGTGCGAAGAACTTATCCATTTGGTTTGGATCCTAAATGGCACGGTACTAGGAGTGAATTGCCATTTCTTAATTCCCTAAAGATGAAGATGTCAATCCTACTGGGTGTAGCCCAAATGAATCTTGGAATTATATTGAGTTACTGTAATGCCAAGTACTTTGGAAATGACATCAATATCTGGCACCAGTTCATTCCCCAGATGATATTTTTAAACAGTTTGTTCGGCTATCTTTCACTCCTCATTATCGTTAAATGGTGTACTGGATCTCAAGCTGACCTGTATCATGTGATGATATACATGTTCCTAAGTCCTACTGATGATTTGAGTGAAAACCAGCTCTTTGTGGGCCAAAAGCTCCTTCAACTTGTGTTATTATTGTTGGCACTCATTGCTGTACCCTGGATGTTATTCCCAAAACCTTTTATCCTGAAGAAGCAACATCAAGAAAGACATCAAGGTCAATCTTACTCTTTGCTTCATCACATTGATGACCCTCTTGAAGCAGAACAATGCAGCCAAACTGATCACCATGAGGAGTTTCATTTCAGCGAGATTTTTGTACACCAACTTATACATACAATAGAATTTGTTCTGGGCGCAGTATCTAATACAGCTTCATATTTACGTTTATGGGCTCTCAGTCTTGCTCATTCAGAGCTATCAAGCGTATTCTATGACAAAGTTCTGCTTCTGGCTTGGGGGTTTAACAACTTATTCGTTCTCATTATTGGCATTATTGTTTTCATTTTCGCAACTGTTGGTGTGCTTCTGATAATGGAAACTTTAAGTGCGTTCCTGCACGCTTTAAGGCTCCACTGGGTAGAGTTCCAGAACAAGTTTTACGAAGGAGATGGTTACAAGTTCAGCCCATTTTCATTCAATGCTTTACTTAACGAAGAGGACGAATCATAG 2460 0.4069 MIDGGRFPTMDLLRSEPMQLVQLIIPTESAYRAVSYLGDLALFQFKDLNAEKSPFQRTYAAQIKRCGEMTRKLRFFKEQMAKAGVSPLTRSMRDGEADLDYLEIKLAELEAELVENNANNDKLQHSYSELLEYKLVLQKVGEFFFPAQKSAASQQREVGVPSNSKGSIDSPLLQEQEMTTETSKPMKLGYIAGLVPREKSMSFERILFRATRGNCFLKQATIEHPVLDPLSGEKVDKNVFLIFFSGERTHSKILKICDAFGANRYPFTDDLTKQFQMIKEVSGRLSELNTTVDAGLRHRSTILQTIGYHYETWSLLVKKAKSIYHTLNMFNIHVTKRCLVAEGWCPVFATIQIQSALHRASMDSNSQVGTIFQVLQTKESPPTHLRTNKFTSAFQEIVDAYGIAKYREANPGVFTIITFPFLFAVMFGDWGHGICLLLATLYFIIRERKFSSQKLGDIVEMTFGGRYVIMMMALFSIYTGFIYNEFFSVPFELFGPSAYGCHDPSCRDATTTGLIKVRRTYPFGLDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYCNAKYFGNDINIWHQFIPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLSENQLFVGQKLLQLVLLLLALIAVPWMLFPKPFILKKQHQERHQGQSYSLLHHIDDPLEAEQCSQTDHHEEFHFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNLFVLIIGIIVFIFATVGVLLIMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSFNALLNEEDES 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1117 819 Coils Coil 92 126 - -
Mibi05g1117 819 PANTHER VACUOLAR PROTON ATPASES 12 815 IPR002490 GO:0033179|GO:0046961|GO:1902600
Mibi05g1117 819 PIRSF ATP6V0A1 8 819 IPR026028 GO:0000220|GO:0046961
Mibi05g1117 819 Pfam V-type ATPase 116kDa subunit family 36 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1117 Mibi-ChrMibi05 13535696 13542220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1117 10 817 Primary Pumps ATPases(2) AT4G39080 74.042 0.0 1243