Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1099 ATGGAATCTACCAATCTCCATCACCACCTCCCTCAAGACCATGATCCTCCCCAGTCTTCTTCTCTCTTTCCCCTCCCCACCACCGCCCATTCTTGGTCTCCCACTGTCTCTCTGAATAATGCTGGTAACTTGAACACAAATTTGCAAGAGGAAAATCACAGATCAAGAGCTTTCACGCACAAACAACACATTGGAGCTCATCATAATCTTCCCAACGCTTCAGGATTATCAGGTTATAATCAGTGGACAAGTGGGGAAGAAAGCTGTGTAAGCAATACTCATCATCAGTACGACTTGGAGCTTCAGTATTCAAAGATTAAACAAGAAATCTCGCCGTCAGGAGTTTTTCCCTGTAAATTCACTGAAATGCTAAACAGTTCGGGTGGTTCCAATACTAATATGGAGCATCATCACAAAGATAATTTCAATGCTCTTAGTGAGAAGCTCTTGCTCAAGAGCCTCTCTTCTGGAGACTTTTATGCCACTTCTCCTTCCCAAAATATTCCTAATAATAATTTTGGTGGTGGTTTGGGTATGGGAATACCACCACCTAGTAGAAGGACAAGCTTTAGCCAGATTTACCCAAGTATTAATATTTCAAACTTAAACAACCATTCTTCTTCTTCTTCTTCCTCCCCACCAGCTATTTCTAGCTCTTTGGATATGAACATGCATAGCTCAGATCTATTATTGAACTCTGCAAGATTTAATGGCGGTTTGAGCTTACATGCCCAAGATGGTTTCTCCAGATTTGACAACGTTTCTTCTTTTCGTCTTGATCATCATATGCATCACCACCACCAAATCGACAGGTCCTCATGCAGCTCCAATAATCCATCACACTTCAGTAATGGCATGGCAGAAACGAAGAGGCCCATCAACACAAGTTTGGTGGAGTCAAAGGCTTCTCAATCTCAAAATGTGCCAAAAAAATCAAGATTGGATCAATCTCGCTCATCATGCCCTCCCTTTAAGGTTAGGAAAGAGAAACTAGGAGATAGAATTGCGGCTCTTCAACAGTTGGTGGCTCCTTTTGGCAAGACGGACACAGCATCCGTACTCATGGAGGCCATTGGATACATCAAATTCCTTCAAAGCCAGGTCGAGACACTAAGCGTTCCATATATGAAGTCATCACGGAACCAGAACAACAGAATCATGCAAGGGGCTTCAGGGTTAAGTGAGGCAAGAGAAGAACCAAAAATGGATCTGAGGAGCCGAGGCCTATGTCTCGTGCCATTGTCATGCATGTCTTACTTAGCTGCTGATGCTGGTGCTGGCGGTGGTGTAATGTGGCAACAACCTGATTTTGGTGGCCCAACCCTATGA 1329 0.4364 MESTNLHHHLPQDHDPPQSSSLFPLPTTAHSWSPTVSLNNAGNLNTNLQEENHRSRAFTHKQHIGAHHNLPNASGLSGYNQWTSGEESCVSNTHHQYDLELQYSKIKQEISPSGVFPCKFTEMLNSSGGSNTNMEHHHKDNFNALSEKLLLKSLSSGDFYATSPSQNIPNNNFGGGLGMGIPPPSRRTSFSQIYPSINISNLNNHSSSSSSSPPAISSSLDMNMHSSDLLLNSARFNGGLSLHAQDGFSRFDNVSSFRLDHHMHHHHQIDRSSCSSNNPSHFSNGMAETKRPINTSLVESKASQSQNVPKKSRLDQSRSSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQSQVETLSVPYMKSSRNQNNRIMQGASGLSEAREEPKMDLRSRGLCLVPLSCMSYLAADAGAGGGVMWQQPDFGGPTL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1099 442 Gene3D - 325 390 IPR036638 GO:0046983
Mibi05g1099 442 CDD bHLH_AtbHLH_like 322 372 IPR045239 -
Mibi05g1099 442 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 315 364 IPR011598 GO:0046983
Mibi05g1099 442 FunFam Transcription factor bHLH123 family 325 387 - -
Mibi05g1099 442 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 144 418 - -
Mibi05g1099 442 MobiDBLite consensus disorder prediction 299 323 - -
Mibi05g1099 442 MobiDBLite consensus disorder prediction 1 27 - -
Mibi05g1099 442 MobiDBLite consensus disorder prediction 272 287 - -
Mibi05g1099 442 MobiDBLite consensus disorder prediction 299 319 - -
Mibi05g1099 442 MobiDBLite consensus disorder prediction 268 287 - -
Mibi05g1099 442 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 325 377 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1099 Mibi-ChrMibi05 13370207 13374263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1099 27 419 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 43.160 1.63e-66 218