Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1058 ATGCTGAGGGACGAAGTTGTCGGTTCGAGGAGCGCGAGGCATAGTGCCTCCGTGTCGGAGGCGTCGAATAAAGTTCTGGTGGCCGTTAAGGCTGAGAGAGTGATCTCCAAAACCGCATTGACCTGGGCACTCACTCATGTCGTTCGCTCCAGCGATTGCATCACGCTTCTCGCTGTATATTGTGGCGAGAAAACTGGCAGAAGGTTCTGGAATTTTTCGAGATTTGGAGGAGATTGCACGAATGGACGTCGGGAAAAGCTGCCGGAGCGGATTCATGAAATCTCCGACTCTTGTGCGCAGATGGTGCTTCAGTTGCACAATCAGACTGAGGTGAGGGTGAAGATCAAGGTGGTCACGGGCACACCCAGTGGAGCGGTGGCAACTGAATCAAGATGCAGTGGGTTTAATTGGGTCATACTGGACAAGAAGTTGAAACAAGAGGTCAAGCATTGCATGGATGAACTCCAATGTAGTATTGTGGTGATGAATGGTTCACAGCCAAAAGTTTTAAGGCTCAATTTAGGATCCTCCGATGAATTCCAAACCCCCACCTTTTCTGCTGCCTCTTCGCCAGGGATGGATATTGGAAGGCTAAGAGGTCACAGATTGAAGCCCTCCACCCCAGTCAGTAGCCCTGAAGACGTATCTACTTCTAATACAACATCTACCTTGGTAAATTCAGTGTCATCTTATGACACCACGACTTCTTTTTTTCTGGTTTATGAACAAAATCCTCTGTTCGAGGGTCAGGGTCCACAGAGAAGAAAACAGAAACCAATCAATGAATCAAAAACTTTCGACGGCCAGCCACCATTAGCCATTGAAATGGACAGGGAAAGGACTCTCCGTTTGACCAAATCTCCGGTATCATCTGTTGTTAGTGATGAGAAAAGTGTGTTTTGGAGCCCTCAAAATGACCTTGTCGTTGATGAGAAGCCTCAAATAACAGAAAACAATGGAATTAGTCAAAGATATAAATCTCCCACTTCTAAAACTTTACTTGAAAGATTTGTAAATTGTGATGAGGAGGTGTGGGGTGAGGAATTAGGATATAAACAAGCTCTAAGTGGAAATCTTGTTGTGAAATCAGGCATTAAGGATACTATTCCTGCAGCCAGAACTTCCTCTGTTCCTCCTCCCTTATGCTCACACTGTCAAAACAAAGCACCAGTTTTTGGAAAACCTCCTAGACGCTTCCATTACAAAGAAATAGAGGAAGCTACTAATATGTTTTCAGATGCGAATTTTCTGGCTGAAGGCGGATTTGGGATAGTTCACAAGGGAGTGCTACGAGACGGCCAGGTCGTTGCAGTGAAACAGTTAAAGTTTAGTGGCTCTCAGGCAGATCTTGATTTCTGCAGGGAGGTCCGAGTATTGAGCTGCGCACAACACAGAAATGTTGTGCTGTTGATAGGATTCTGCTTAGAGGGCGATTTGAGGATATTAGTCTATGAGTACATTTGCAATGGATCCTTAGAGCTCTACCTTCATGGAAAGAACAGGGGCGCTCTGGATTGGAACTCGCGCTTGAAGATAGCAATAGGAGCTGCACGAGGCCTGCGCTACCTTCACGAGGATTGTAGAGTTGGCCGTATAGTGCACAGAGACTTTCGACCTAGGAATATCCTCTTAACCCACGATTTTGAGCCTGTGTTGGCGGATTTTGGCCTTGCAAGGTGGCAGTCGGAATGGAGCATAAATGCTGATGATAGATTCATCGGAACTTCAGGGTATCTTGCGCCGGAGTATCTTGAAGCCGGAAACCTTACATATAAAGTAGATGTGTATGCATTTGGAATTGTCTTGTTAGAGTTAATAACAGGTCGAAGAATTAGTGAGTTGGAACATAAAAACGGACCCTCGTTTCTTTCCGAATTCTTTCACCCCCTGCTCATGGTAGAACCCAATCATATTTTAGAAAACCTCCAGATTCTGAATCCATGCCTGGAGTTTGAGTCGTCACAGGAATTTAATCTTCAGTTACAAGCAATGGCCCGAGCTGCTTCCTTGTGTCTACGTCTAGATCATAATGCCAGACCCCCAATGTCAAAGATCTTGAGAATGCTGGAAGGGGGCGATGCAGTTCGTCCTATTGGTTTAGACCCGAGCTCAGTTGGTAACACAAGTGGGCATTTAAGTGGATTAAAGTCCCACAATCAACCTAAAGGTGGAAGAAGCCACTCTCGTAGGCTCTCTCATTGA 2202 0.4564 MLRDEVVGSRSARHSASVSEASNKVLVAVKAERVISKTALTWALTHVVRSSDCITLLAVYCGEKTGRRFWNFSRFGGDCTNGRREKLPERIHEISDSCAQMVLQLHNQTEVRVKIKVVTGTPSGAVATESRCSGFNWVILDKKLKQEVKHCMDELQCSIVVMNGSQPKVLRLNLGSSDEFQTPTFSAASSPGMDIGRLRGHRLKPSTPVSSPEDVSTSNTTSTLVNSVSSYDTTTSFFLVYEQNPLFEGQGPQRRKQKPINESKTFDGQPPLAIEMDRERTLRLTKSPVSSVVSDEKSVFWSPQNDLVVDEKPQITENNGISQRYKSPTSKTLLERFVNCDEEVWGEELGYKQALSGNLVVKSGIKDTIPAARTSSVPPPLCSHCQNKAPVFGKPPRRFHYKEIEEATNMFSDANFLAEGGFGIVHKGVLRDGQVVAVKQLKFSGSQADLDFCREVRVLSCAQHRNVVLLIGFCLEGDLRILVYEYICNGSLELYLHGKNRGALDWNSRLKIAIGAARGLRYLHEDCRVGRIVHRDFRPRNILLTHDFEPVLADFGLARWQSEWSINADDRFIGTSGYLAPEYLEAGNLTYKVDVYAFGIVLLELITGRRISELEHKNGPSFLSEFFHPLLMVEPNHILENLQILNPCLEFESSQEFNLQLQAMARAASLCLRLDHNARPPMSKILRMLEGGDAVRPIGLDPSSVGNTSGHLSGLKSHNQPKGGRSHSRRLSH 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1058 733 Pfam Protein tyrosine and serine/threonine kinase 416 655 IPR001245 GO:0004672|GO:0006468
Mibi05g1058 733 MobiDBLite consensus disorder prediction 248 269 - -
Mibi05g1058 733 PANTHER OS01G0750732 PROTEIN 174 691 - -
Mibi05g1058 733 ProSiteProfiles Protein kinase domain profile. 411 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1058 733 Gene3D HUPs 9 179 IPR014729 -
Mibi05g1058 733 SUPERFAMILY Protein kinase-like (PK-like) 391 690 IPR011009 -
Mibi05g1058 733 MobiDBLite consensus disorder prediction 702 721 - -
Mibi05g1058 733 MobiDBLite consensus disorder prediction 699 733 - -
Mibi05g1058 733 ProSitePatterns Tyrosine protein kinases specific active-site signature. 532 544 IPR008266 GO:0004672|GO:0006468
Mibi05g1058 733 MobiDBLite consensus disorder prediction 201 220 - -
Mibi05g1058 733 Gene3D Transferase(Phosphotransferase) domain 1 487 696 - -
Mibi05g1058 733 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 383 486 - -
Mibi05g1058 733 FunFam Os07g0541700 protein 487 575 - -
Mibi05g1058 733 Gene3D Phosphorylase Kinase; domain 1 376 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1058 Mibi-ChrMibi05 12982158 12987655 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1058 375 690 Trihelix Transcription Factor Family AT5G38560 41.212 5.98e-74 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mibi05g1058 PK_Tyr_Ser-Thr 2.3e-40 CL0016