Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1031 ATGGAACCCATCATCAATAATTTTAGATGCTCCTCTTCCACTTCTTCCTCTGATGATGATGACTCTTCCACTTCAGGCTCTTCCTTCAATTCTAGTAACCCCCTCCAATACACAACGACCAACAACAACAACAACCACCTCGACAAAATCAAAGGCCCATGGAGCGCCCAAGAAGACCGGATCCTGACCCGACTCGTTGAACGATATGGGCCCAGAAACTGGTCCCTAATTAGCCGCTACATTAAGGGAAGATCCGGCAAATCCTGCCGTCTACGGTGGTGCAATCAGCTTAGCCCCACCGTGGAACACCGTCCATTTTCCCAACAAGAGGATGACATCATCATTTCGGCCCACGATCAGTACGGTAATAGGTGGGCCACCATAGCCCGACTCCTTCCGGGTCGGACCGATAATGCGGTTAAGAACCACTGGAACTCCACTCTTAAGAGGAGGGTGAGGGATCGGCGTGCGGCGGAGGAAGGTGGCTCCGGCGGGAGGGGTGGTGCTTCTCCGGGATCTGTACGCCCTTGCCTGGGGTTGGACATGGAAGATGACCCGTTGACTGCGTTGACTCTTGGTCCGCCGGGAGCTGACGTGGCGGTTGCTGAGCGCCGGCCTACGTCGGATAATGTTGCGCCGGCGCCGGAGTTCTGGGATGTGATGAAGGGTGTGATAGCAAGGGAAGTTAGAGATTATGTTTCTTCCTCTTTTTCTGATAACCAAGGTTTCCATTGA 735 0.5361 MEPIINNFRCSSSTSSSDDDDSSTSGSSFNSSNPLQYTTTNNNNNHLDKIKGPWSAQEDRILTRLVERYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRPFSQQEDDIIISAHDQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRDRRAAEEGGSGGRGGASPGSVRPCLGLDMEDDPLTALTLGPPGADVAVAERRPTSDNVAPAPEFWDVMKGVIAREVRDYVSSSFSDNQGFH 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1031 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 152 IPR017930 -
Mibi05g1031 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 101 IPR017930 -
Mibi05g1031 244 ProSiteProfiles Myb-like domain profile. 98 148 IPR001005 -
Mibi05g1031 244 FunFam MYB transcription factor 51 102 - -
Mibi05g1031 244 MobiDBLite consensus disorder prediction 1 50 - -
Mibi05g1031 244 PANTHER MYB PROTEIN-RELATED 44 198 - -
Mibi05g1031 244 Pfam Myb-like DNA-binding domain 54 111 - -
Mibi05g1031 244 MobiDBLite consensus disorder prediction 1 51 - -
Mibi05g1031 244 CDD SANT 53 95 IPR001005 -
Mibi05g1031 244 MobiDBLite consensus disorder prediction 151 177 - -
Mibi05g1031 244 Gene3D - 104 162 - -
Mibi05g1031 244 ProSiteProfiles Myb-like domain profile. 46 97 IPR001005 -
Mibi05g1031 244 SMART sant 102 150 IPR001005 -
Mibi05g1031 244 SMART sant 50 99 IPR001005 -
Mibi05g1031 244 Gene3D - 50 102 - -
Mibi05g1031 244 CDD SANT 105 148 IPR001005 -
Mibi05g1031 244 SUPERFAMILY Homeodomain-like 48 144 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1031 Mibi-ChrMibi05 12676383 12677117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1031 40 168 MYB Transcription Factor Family AT4G37260 63.846 1.12e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi05g1031 Myb_DNA-bind_6 4.2e-16 CL0123