Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1010 ATGTCAACCAAGAGTGAGAGTGAACACCACACAGTCCCCCTGTCGGTGCTCCTGAAGCGTGAATCAGCCAGCGAGAAAGTTGTTAAACCTGAAATTCAGCACGGTGAAGCAAACCAGAGCAAAAAGGGAGAGGACTTCACGCTACTAAAAAGGGAATGCCAGAGGGTGGTGGGGGACGGGGTGTCGAAATATTCTGTTTTCGCACTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATGCCAAGGAGAATCTCCTAAATAATATTTTAAGTGCGATTCCTTCAGATCTTTACAGAGATGAGTGGATAGCAGCTTTGCCTCGGGCTTTAGTTGCAGGCTTTGTAAAAACCGATAAAGATTTTCAAGAGACAGCTAGAACATCAGGAACAACTGTGACCTTTGTGATTATAGAAGGATGGGTTGTCACGGTTGCATCTGTTGGTGATTCCCAATGCATACTTGAACCTTCTGAAGGTGGGCTTTATTACCTTTCAGCAGATCATAGGCTGGACGCCAATGAAGAGGAGGTGACACGTATAACAAGTAGTGGGGGAGGAGTTAGTCGGCTAAATACTGGTGGAGGTGCAGAGGTTGGTCCTTTGAGATGTTGGCCCGGTGGCTTGTGTCTTTCAAGATCCATTGGTGATATGGATGTTGGACCATTCATTGTTCCTGTACCTTACGTAAAGCAAGTGAAGCTTTCCTCATCTGGAGGCAGACTTATCATCTGCAGTGATGGTGTATGGGATGCTCTATCTGCGGAAACAGCCCTTGATTGTTGTCGTGGGATGTCACCAGAAGTTGCAGCACCGCACATAGTTAAAGAAGCGGTACAAGCAAAAGGACTTAAAGATGATACAACCTGCATTGTTGTTGATATTTTACCCCCAGAGAAACCACCTGCTCCTCCTTCGGCACAAGCTAGGAGACCAATGAAAGGAATGTTCAAATCCATGTTTCAGAGAAAGTCTGCAGAATCATCTTCATATAATGAAAAGGATTATATGGAGCCTGATGTGGTATTGGAGCTGTATGAGGAAGGATCCGCGTTGCTTTCAAAGAGGTTGCACACAAAATATCCACTCTGCAACATGTTCAAGCTGTTTATATGTGCAATCTGTCAAGATGATATGAAGCCTGGGGAGGGTATATCAATACACGAAGGAGCATCCAACCCAGGAAAATTGCGTCCCTGGGATGGCCCATTCCTTTGTCGAAGTTGCCAAAACAAAAAAGAAGCCATGGAAGGGAAAAGAAAAATAGTTAGAAGATTCTCAATTGCATGTTATACGATTTCTGACTTGGAGGAGTGGAATAGCAACCACCCAAGCGTTGTGGAAGGTTGTGTTAACTGCAGCGTACAATACTACAATAGGAATATAGGATGTTGGAGGGAATTCTATCCCACGCAAGCTTGGAAGTGTGTTGAGCCGTTTAAATGA 1446 0.4461 MSTKSESEHHTVPLSVLLKRESASEKVVKPEIQHGEANQSKKGEDFTLLKRECQRVVGDGVSKYSVFALFDGHNGSAAAIYAKENLLNNILSAIPSDLYRDEWIAALPRALVAGFVKTDKDFQETARTSGTTVTFVIIEGWVVTVASVGDSQCILEPSEGGLYYLSADHRLDANEEEVTRITSSGGGVSRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGPFIVPVPYVKQVKLSSSGGRLIICSDGVWDALSAETALDCCRGMSPEVAAPHIVKEAVQAKGLKDDTTCIVVDILPPEKPPAPPSAQARRPMKGMFKSMFQRKSAESSSYNEKDYMEPDVVLELYEEGSALLSKRLHTKYPLCNMFKLFICAICQDDMKPGEGISIHEGASNPGKLRPWDGPFLCRSCQNKKEAMEGKRKIVRRFSIACYTISDLEEWNSNHPSVVEGCVNCSVQYYNRNIGCWREFYPTQAWKCVEPFK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1010 481 CDD PP2Cc 41 295 IPR001932 -
Mibi05g1010 481 PANTHER PROTEIN PHOSPHATASE 28 294 - -
Mibi05g1010 481 MobiDBLite consensus disorder prediction 1 24 - -
Mibi05g1010 481 SUPERFAMILY PP2C-like 38 295 IPR036457 -
Mibi05g1010 481 SMART PP2C_4 21 293 IPR001932 -
Mibi05g1010 481 ProSiteProfiles PPM-type phosphatase domain profile. 26 295 IPR001932 -
Mibi05g1010 481 FunFam probable protein phosphatase 2C 12 34 301 - -
Mibi05g1010 481 Pfam Protein phosphatase 2C 56 279 IPR001932 -
Mibi05g1010 481 SMART PP2C_SIG_2 56 295 IPR001932 -
Mibi05g1010 481 Gene3D - 33 300 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1010 Mibi-ChrMibi05 12509084 12514000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1010 1 427 PP2C-type Phosphatase Gene Family AT1G47380 76.744 0.0 679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1636 08 32929191 32933919 Mibi05g1010 05 12509084 12514000 CCT
Mibi05g1010 05 12509084 12514000 Mibi05g1010 05 12509084 12514000 ECH