Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0998 ATGGAGCTCTTCGCCTACACCACACCTAAGACCGCCGGGAACTTCCGTGCCCTATGCACCGGTGAGAAGGGAAACGGCCGGAGCGGCAAGCCGCTCCACTACGAGGGCTGGATCTTCCACCGTGTGATCCCAGAGTTCATGTGCCAGGGCGACGATTTCACAGCCAGCAACGGCACCGGCGGTGAGTCGATCTACGGCGAGAAGTTCGTGAAGAAGCACACTGGTCCTGGGATTCTGTCTATGGCAAATGTCGGACCTGGAACGAACGGATCGCAATTCTTCATATGTACGGAACAGACGCCGTGGCTGGACGAAGCGCATGTGGTGACAGTGGTGTTTGGTCAAGTAGTGGAAGGCATGGAGGTGGTTAGGGAGATCGAGAGGGTTGGGTCTCGGAGCGGCATGACGTCGAAGCCGGTGGTGATTGCTGACTGTGGTCAACTGAGCTTAGAGAAGAAGATGACTTCTGGTGACTCTGACTCTATGGTGGCCACTAACGGAGACGATCGTGGAACTCAACCACCATAA 528 0.5625 MELFAYTTPKTAGNFRALCTGEKGNGRSGKPLHYEGWIFHRVIPEFMCQGDDFTASNGTGGESIYGEKFVKKHTGPGILSMANVGPGTNGSQFFICTEQTPWLDEAHVVTVVFGQVVEGMEVVREIERVGSRSGMTSKPVVIADCGQLSLEKKMTSGDSDSMVATNGDDRGTQPP 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0998 175 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 1 148 - -
Mibi05g0998 175 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 146 IPR002130 GO:0000413|GO:0003755
Mibi05g0998 175 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 147 IPR002130 GO:0000413|GO:0003755
Mibi05g0998 175 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 3 18 IPR002130 GO:0000413|GO:0003755
Mibi05g0998 175 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 77 92 IPR002130 GO:0000413|GO:0003755
Mibi05g0998 175 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 39 51 IPR002130 GO:0000413|GO:0003755
Mibi05g0998 175 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 92 104 IPR002130 GO:0000413|GO:0003755
Mibi05g0998 175 SUPERFAMILY Cyclophilin-like 1 148 IPR029000 -
Mibi05g0998 175 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 148 - -
Mibi05g0998 175 PIRSF Peptidylpro_ismrse 1 153 IPR024936 GO:0003755
Mibi05g0998 175 MobiDBLite consensus disorder prediction 154 175 - -
Mibi05g0998 175 Gene3D - 1 156 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0998 Mibi-ChrMibi05 12355602 12356129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0998 1 129 U-box Gene Family AT5G67530 40.741 7.97e-20 84.0