Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0988 ATGGAAGGTTACGATGGCACTGTGAGGCTCGGAGCTCTTCAAATGAACCATGATCGGAATGAATTTGACTCTGGCCCTGACGTTTCTGTTTCTTCTCCCGTTACCAGACAGAAGGCCGCCGCCGCTAAACAGTTCATTGAAAATCACTACAAGAATTATCTTCAAGGATTGCAGGATCGAAAAGAGAGACGTAGAGCACTTCAAAGGCAAGCTCAAGAAGCTCAAGTATCAACTGAAGAACAAGAGGAAATGATGAGAAATTTGGAGCGCCGAGAGACTGAATTCATGAGACTGCAGAGACGTAAAGTTGGAATTGATGACTTTGAGCAGTTAACCGTGATTGGTAAAGGTGCTTTTGGTGAGGTGAGATTATGTCGTGCGAAAGGTACAGGAGAGATTTATGCCATGAAGAAATTGAAGAAATCAGAGATGCTTAGCCGAGGACAGGTGGAACATGTTCGATCTGAGAGGAATTTGTTAGCAGAGGTTGATAGCCGATGCATTGTAAAACTTCATTACTCATTCCAAGATTCTGATTTCCTGTATCTCATCATGGAGTATTTACCCGGAGGTGACATTATGACATTATTAATGAGAGAAGATATCCTTTCTGAAGATGTTGCTCGCTTCTACATTGCTGAGAGCATCTTAGCTATCCACTCAATACATCAGCACAATTACATTCACAGGGATATAAAACCAGATAATTTGATACTGGATAGAAAGGGCCATCTGAAGCTATCAGATTTTGGCTTATGTAAGCCTCTTGATGATAAGTATTCTTCAATTTTGTTGGAAAGTGAAGATTTTACCAACGAATCAACGAGTGAAGTTGATGGATATTCTGTGTCCCCGTGGTCGATGCCAAAGGAGAAATTACAGCAGTGGAAACGTAATCGCCGAGCATTGGCATACTCAACTGTTGGAACCCTTGATTATATGGCACCTGAAGTTTTGCTCAAAAAGGGCTATGGAATGGAATGTGATTGGTGGTCTCTTGGGGCTATTATGTATGAGATGCTTATTGGATATCCTCCCTTTTGTTCTGATGATCCAAGGATGACATGTCGTAAGATAATTAACTGGAAAACATGCCTTAAATTCCCTGGAGAACCCAAGATATCAGCTGAGGCCAAAGATCTGATTTGTCACTTATTATGTGACGTGGACACAAGATTTGGAACCAGAGGTGTCGAAGAAATAAAGGCTCATCCATGGTTCAAATCTATTCAGTGGGATGCGCTTTATGAAATGGAAGCTGCATATAAACCTACAGTCACTGGAGACTTGGACACACAAAACTTTGAGAAGTTTCCTGATTTAGAAGGACCACCATCCGCAACAGCTACTGTGGGACCTTGGCGGAAGATGTTGACATCTAAAGACACCAACTTCATAGGATTTACATTTAAGAAATCAGATGTCCTTAAATCAATAGGAAGTTCAGATACTGATGCCAGATTGCATGGATCAGCACAAAATCCGTCCCTAATTTCCTTGTTAGGTCGTATTGATTTGCAAGACACTGCCATTCCAGAAACTGAGCAGAAACCAGATACTTGA 1563 0.4146 MEGYDGTVRLGALQMNHDRNEFDSGPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKERRRALQRQAQEAQVSTEEQEEMMRNLERRETEFMRLQRRKVGIDDFEQLTVIGKGAFGEVRLCRAKGTGEIYAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYIHRDIKPDNLILDRKGHLKLSDFGLCKPLDDKYSSILLESEDFTNESTSEVDGYSVSPWSMPKEKLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRMTCRKIINWKTCLKFPGEPKISAEAKDLICHLLCDVDTRFGTRGVEEIKAHPWFKSIQWDALYEMEAAYKPTVTGDLDTQNFEKFPDLEGPPSATATVGPWRKMLTSKDTNFIGFTFKKSDVLKSIGSSDTDARLHGSAQNPSLISLLGRIDLQDTAIPETEQKPDT 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0988 520 FunFam Non-specific serine/threonine protein kinase 79 191 - -
Mibi05g0988 520 SMART pkinase_C_6 408 472 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mibi05g0988 520 FunFam Non-specific serine/threonine protein kinase 192 259 - -
Mibi05g0988 520 Pfam Protein kinase C terminal domain 426 470 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mibi05g0988 520 SUPERFAMILY Protein kinase-like (PK-like) 84 458 IPR011009 -
Mibi05g0988 520 ProSiteProfiles Protein kinase domain profile. 108 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0988 520 FunFam Non-specific serine/threonine protein kinase 306 425 - -
Mibi05g0988 520 Gene3D Phosphorylase Kinase; domain 1 105 436 - -
Mibi05g0988 520 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 446 - -
Mibi05g0988 520 CDD STKc_NDR_like 106 471 - -
Mibi05g0988 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Mibi05g0988 520 ProSiteProfiles AGC-kinase C-terminal domain profile. 408 480 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mibi05g0988 520 Pfam Protein kinase domain 108 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0988 520 Coils Coil 57 101 - -
Mibi05g0988 520 SMART serkin_6 108 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0988 520 Gene3D Transferase(Phosphotransferase) domain 1 192 425 - -
Mibi05g0988 520 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0988 Mibi-ChrMibi05 12255703 12260871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0988 1 517 AGC Kinase Gene Family AT5G09890 76.200 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mibi05g0988 Pkinase 6.3e-64 CL0016