Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0982 ATGGATTATGGCACAAGTGATAGGCCAAAGTGGTCATTCTCATGGGCATCTCACGATGAGATGAACTTGACTCCCCAATTCTCAGGAGCTTACACCGACGGTTACTATGAATCAACGGGCGTACCTGTGCCATTTCCACAGCCTGAGCTCCGAGGAACAACACCTACAATCTACAAACCTAATTGGTGGTCGGTCACGAGTAACGCTACTGGTCAAGAAGAAGATGAAACCAGCTTGTCGGAGAAAGGGAAGAACAAGATGATGAGGGAGATGATATTTAGGATGGCAGCGATGCAGCCAATAGAGATAGACCCTGAGACAGTGAAGCCACCAAAGAGAAGGAACGTTAAGATATCAAAGGACCCTCAAAGCGTGGCGGCTCGCCATCGCAGAGAAAGAATCAGCGAGAGGATTAGGATATTGCAGAGATTGGTGCCAGGTGGCACTAAAATGGACACTGCCTCTATGTTAGATGAGGCTATTCACTACCTCAAATTCTTGCAGTCCCAGGTTCGGTCTCTCCAACGTGCAGCCTCAAACAATACCACACCACCACTCACAGATCTCTTCATCTCCTTTGGACCCAATCCAACCCAAACACCTCATAATCCCCACGCCAATATTTTTCCTGAGATGCATAACTTCAAATGTTATAATTAA 660 0.4682 MDYGTSDRPKWSFSWASHDEMNLTPQFSGAYTDGYYESTGVPVPFPQPELRGTTPTIYKPNWWSVTSNATGQEEDETSLSEKGKNKMMREMIFRMAAMQPIEIDPETVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYLKFLQSQVRSLQRAASNNTTPPLTDLFISFGPNPTQTPHNPHANIFPEMHNFKCYN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0982 219 CDD bHLH_AtIND_like 119 175 - -
Mibi05g0982 219 SMART finulus 124 173 IPR011598 GO:0046983
Mibi05g0982 219 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 176 IPR036638 GO:0046983
Mibi05g0982 219 Gene3D - 117 183 IPR036638 GO:0046983
Mibi05g0982 219 FunFam BHLH transcription factor 121 184 - -
Mibi05g0982 219 Pfam Helix-loop-helix DNA-binding domain 128 168 IPR011598 GO:0046983
Mibi05g0982 219 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 70 207 IPR045843 GO:0003700|GO:0006355
Mibi05g0982 219 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 118 167 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0982 Mibi-ChrMibi05 12194450 12195109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0982 61 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 68.595 1.10e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi05g0982 HLH 1.7e-07 No_clan