Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0981 ATGGCTCTTCTGCTGGAGAATTGCGATGGCATATTACTCTCCCTTGACTCCCACAAATCAGTGCCTGCCCCCTTCCTCACCAAAACCTACCAGCTCGTAGACGATCCCTCCACAGATCACATAGTCTCTTGGGGTGAAGATGACACAACCTTCGTGGTTTGGCGCCCCCCTGAGTTCGCCCGTGACCTCCTCCCCAACTACTTCAAACACAACAACTTCTCCAGCTTCGTCCGCCAGCTCAACACCTACGGCTTCAGGAAGATTGTGCCTGACAGATGGGAGTTCGCTAATGAGTTCTTCAAGAAAGGAGAGAAGCACTTGCTGTGTGAGATTCACCGCAGGAAAACTGCTCAGCCACATCATCTTCATCATCAGAACCACCACCACCACGGTGTTGGAGTTCCGGCTTTCTTTCCCTTCCCTACTTCCAGGCTTAGCATCTCTCCTCCCTCTGACTCCGACGACCACCTCAATTGGTGTGACTCGCCGCCGTTGACTTCTCCCGCAAATGTTCCTTCCCTCATCAATGGTGTCAACTATGTCAACAACCACAACAACCTCATTAACAACAACAACTCTTCCTCCTTCACTGCTCTTTCCGAGGACAACGAAAGACTCCGACGAAGTAACAACATGCTCATGTCGGAGCTTGCTCACATGAAGAAGCTTTATAATGATATCATTTACTTTGTTCAGAATCATGTCAAACCAGTCCCTCCTAGTAATTCCTACCCTTCCTCTTTGCTTTCTCCACCACCCATGGCTCCTACTAATAACATTAATGGTTCTTCCATGATGCAAAGGCCGTTGAACCAGCTTTTGGGGTGTTATTCCATGAACAATAAGCAAAATCAGGTTATTGTGAACTCTCCTACCAACACATCCAAGAGCTCCATAACTATAGTTGAAGAGCCCAGTAGTAATACCTGCAAGACCAAGCTTTTTGGTGTGTCGCTTCAGTCTAAGAAAAGGGTGCACCCTGAGTATGGTTTTCATCCTACCAATTCATCTGATGCAAGCAAGGCACGTTTCGCTATGGAAAACGATGATTTGGGCTTGAATCTCATGCCTCCTTCCACTTGTTAG 1086 0.477 MALLLENCDGILLSLDSHKSVPAPFLTKTYQLVDDPSTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPHHLHHQNHHHHGVGVPAFFPFPTSRLSISPPSDSDDHLNWCDSPPLTSPANVPSLINGVNYVNNHNNLINNNNSSSFTALSEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVPPSNSYPSSLLSPPPMAPTNNINGSSMMQRPLNQLLGCYSMNNKQNQVIVNSPTNTSKSSITIVEEPSSNTCKTKLFGVSLQSKKRVHPEYGFHPTNSSDASKARFAMENDDLGLNLMPPSTC 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0981 361 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi05g0981 361 Gene3D - 17 116 IPR036388 -
Mibi05g0981 361 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi05g0981 361 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi05g0981 361 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi05g0981 361 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi05g0981 361 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 285 IPR027725 -
Mibi05g0981 361 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi05g0981 361 FunFam Heat stress transcription factor B-4 17 115 - -
Mibi05g0981 361 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0981 Mibi-ChrMibi05 12185597 12186792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0981 1 360 HSF AT1G46264 53.827 5.81e-119 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi05g0981 HSF_DNA-bind 2.5e-32 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1664 08 33216111 33217305 Mibi05g0981 05 12185597 12186792 CCT
Mibi05g0981 05 12185597 12186792 Mibi05g0981 05 12185597 12186792 ECH