Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0976 ATGACAAACTATGCGTTTCTGAACGATCAGCTTTCGATGCACACCTCAATTTTCGGGCTAAGACTATGGGTTGTGGTGGGCATATGCGTAGGAGCAGCCATAGTTATTGTTCTGTTTCTCATATCTCTCTGGTTCACAAAGCGCAACAACAATTCTTCCAACCATAATAACTCTTCACACAATCCCACCATTCCAAATGTCTCCAAGGAGATCCAGGAAATCAGGATTGACCCGACCCATGGAGGGTCAGACTCATACCCTGAAGCAGAGGCTGAAGGGGATAGGGCCCAAGCCATGCTTGTTCAGCACAAGGGGGATGATAGCCAAAGAATTCACATAGAGATTGGTAAAGATCATAGGATTTCCTATCCTGAGAAGATTGGTGTTGGTGGTGGCTCATCTCATGGAAGTGGTGAACAGAGTTCGATTTCTGTGCCTGAGGTTTCGCATTTGGGATGGGGTCATTGGTATACTCTCAGAGAGCTTGAGGTTTCTACCAATGGTTTTGCGGACGAGAATGTCATAGGTGAGGGTGGCTATGGAATTGTTTATCGTGGGGTGTTGGAAGATGATACCAATGTTGCGATTAAAAATTTGCTGAATAACAGAGGGCAAGCTGAGAAGGAATTTAAGGTAGAAGTTGAAACAATTGGACGTGTTCGGCACAAGAATTTGGTGAGGTTACTTGGATATTGTGTTGAAGGAGCCCACCGGATGTTTGTGTACGAGTATGTTAACAATGGGAACCTAGAACAGTGGCTTCACGGAGATGTTGGGCCTTCTAGCCCTCTAACATGGGAGATTCGCATGAATATAATACTTGGAACAGCAAAAGGGTTGACATACCTTCATGAGGGACTTGAACCTAAGGTGGTTCACCGTGATATAAAGTCAAGCAACATATTGCTGGATAAGCAATGGAATCCAAAAGTCTCTGATTTTGGCCTTGCAAAGCTGTTGGGATCAGAGAGAAGTTATGTGACAACCCGTGTGATGGGAACATTCGGGTATGTAGCTCCAGAATATGCAAGTACTGGCATGTTAAACGAAAGAAGTGATGTGTATAGTTTTGGTGTTCTTATCATGGAGATAATTTCTGGAAGAAACCCAGTAGATTATAGCCGGCCTCCTGGAGAGGTGAACTTGGTTGAGTGGCTGAAATCCATGGTTGCTAGCCGGAATGCAGAGGCAGTGCTCGATCCTAGGCTACCTGAAAAACCTTCTTCAAGGGCACTGAAGCGTGCCTTATTAGTAGCATTGAGATGTGTGGACCCAAATGCCCAGAAAAGGCCAAAGATGGGGCATATCATTCATATGCTTGAAGCTGATGAGTTCCCTTATAGAGATGACCGAAGAACTGGAAGGGAAAATGGACGCTCCCAGAGGATAAGCACAAGAGAAGGGTTGAAGGATAAGCAAGTATGTGAATCAGGTGACAGTAGTGGATATGAAAGTAGTGTCCAAACTATCAAGTCCATGGGCAGAAACCAAGAAACCGAAGACCAACAGCCTAACAAGGTGAATTTACGCCATTTATAG 1539 0.4477 MTNYAFLNDQLSMHTSIFGLRLWVVVGICVGAAIVIVLFLISLWFTKRNNNSSNHNNSSHNPTIPNVSKEIQEIRIDPTHGGSDSYPEAEAEGDRAQAMLVQHKGDDSQRIHIEIGKDHRISYPEKIGVGGGSSHGSGEQSSISVPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYRGVLEDDTNVAIKNLLNNRGQAEKEFKVEVETIGRVRHKNLVRLLGYCVEGAHRMFVYEYVNNGNLEQWLHGDVGPSSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLIMEIISGRNPVDYSRPPGEVNLVEWLKSMVASRNAEAVLDPRLPEKPSSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEADEFPYRDDRRTGRENGRSQRISTREGLKDKQVCESGDSSGYESSVQTIKSMGRNQETEDQQPNKVNLRHL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0976 512 ProSiteProfiles Protein kinase domain profile. 169 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0976 512 Gene3D Phosphorylase Kinase; domain 1 139 244 - -
Mibi05g0976 512 ProSitePatterns Protein kinases ATP-binding region signature. 175 197 IPR017441 GO:0005524
Mibi05g0976 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Mibi05g0976 512 FunFam Probable serine/threonine-protein kinase At1g01540 149 244 - -
Mibi05g0976 512 PANTHER OS01G0323000 PROTEIN 3 464 - -
Mibi05g0976 512 Gene3D Transferase(Phosphotransferase) domain 1 245 454 - -
Mibi05g0976 512 Pfam Protein kinase domain 170 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0976 512 MobiDBLite consensus disorder prediction 448 512 - -
Mibi05g0976 512 MobiDBLite consensus disorder prediction 448 474 - -
Mibi05g0976 512 MobiDBLite consensus disorder prediction 478 503 - -
Mibi05g0976 512 SMART serkin_6 169 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0976 512 FunFam Putative receptor-like serine/threonine-protein kinase 245 455 - -
Mibi05g0976 512 SUPERFAMILY Protein kinase-like (PK-like) 150 441 IPR011009 -
Mibi05g0976 512 CDD STKc_IRAK 175 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0976 Mibi-ChrMibi05 12151050 12153217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0976 136 443 Trihelix Transcription Factor Family AT1G70460 46.326 3.02e-89 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mibi05g0976 Pkinase 1.1e-46 CL0016