Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0971 ATGGAAGAGCCTCAATGCTCTATGGCTACTTTGCCTTCTTTACTCCCACCTGGTTGCCGTTTCTTTCCTTCCCAAGAGCAGCTTCTTTGTTACTATTTACCTAACAAGAACGCCGGCGGTAGTTTCCATGGTTGTGATTTGATTAGGGAGCTTGACCTGTTCGATTACGATCCTTTCCAATTGCCTGAAATTGCGTGCTTTTCTTATGGTTATCGCGGAAGGAGGAGGCATTGGTACTGTTATACTGCCAGGGTTTTGAAGGATTCTAGAAGGAAGACTAGGATGGTCAAGAGTGGGTATTGGATGAGAAAGGGAGGGGTTAGGAATGTTTTCAATGATGGTGGGAATGTTGTTTTGGGTACAAGGACAACTTTCGTTTTCTATTTGGGGAATTCCTTTAATAACGCCGGCAGGACGAATTTGATGTTGCATGAGTATGCTTTGGTTGATCATCGTAAGGCTGCATTTGTTGTTTGTCGAGTATTTTTTAAAGCACTTCATAAGAATAGTGTGTCAGAGAATGGTCTGAGTTCCTGTGCAGAGGAAAGTTTCTCAGCTGTACGTCACATTGGTGTTCAGCATAATGGATGCGTTTCACCTGATATAACTGAGGCTCAAATTTGCGGTGACTGCTCCATTGATAGAAAGATTTCAGTATCTCCCTTGAAACCTGTTAGTGAACTATATGAGAATCAAATAGCAGCTGCACCAGCTTCTATTGCTACTTTCCAGTGTTGTGCAGGTCCTCAAGACAGTGAAGCGGGAAAGCTTTCTGGACTTCCTGGAGGTGGTGCAATATTCGTTGAGGAATTGTCATCTCAGCAACATTTACTTGCGATTCTAGAGGAGGATTTCATAGAGTTGGATGATCTAGCTTGA 879 0.4312 MEEPQCSMATLPSLLPPGCRFFPSQEQLLCYYLPNKNAGGSFHGCDLIRELDLFDYDPFQLPEIACFSYGYRGRRRHWYCYTARVLKDSRRKTRMVKSGYWMRKGGVRNVFNDGGNVVLGTRTTFVFYLGNSFNNAGRTNLMLHEYALVDHRKAAFVVCRVFFKALHKNSVSENGLSSCAEESFSAVRHIGVQHNGCVSPDITEAQICGDCSIDRKISVSPLKPVSELYENQIAAAPASIATFQCCAGPQDSEAGKLSGLPGGGAIFVEELSSQQHLLAILEEDFIELDDLA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0971 292 Pfam No apical meristem (NAM) protein 16 148 IPR003441 GO:0003677|GO:0006355
Mibi05g0971 292 ProSiteProfiles NAC domain profile. 15 164 IPR003441 GO:0003677|GO:0006355
Mibi05g0971 292 SUPERFAMILY NAC domain 9 164 IPR036093 GO:0003677|GO:0006355
Mibi05g0971 292 Gene3D NAC domain 25 168 IPR036093 GO:0003677|GO:0006355
Mibi05g0971 292 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0971 Mibi-ChrMibi05 12116129 12118770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0971 15 171 NAC Transcription Factor Family AT1G76420 36.364 4.37e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi05g0971 NAM 3.2e-20 No_clan