Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi05g0970 | ATGATATTGAAGGAGTCATCCATGATGGGAAGCATGAAGGTGCAACATAACTTGGTACGTGGACTAATGTGGGAGCAAGAACCATCCCTCACTCTTGGCCTCAAACGCTTACGCCCTCTTGCCCCCAAGCTCCCAAACAATAATACTAACCATTCTCATTCTCTTTCATCTTTGGATCTCAACTTCTTCATAAGACCAGAAAGTGGGCCCAGAAAACTGCCTTCGTCCCCTCATAACCTTCATCTCCACCAACATTCACCATCACCTCCTCAGGTGGAAGCACAGCCAGGAGGAACAAGGTGGAATCCAACACAGGAACAGATTGGCATATTGGAGATGTTGTACAGAGGTGGCATGCGAACTCCTAATGCTGAGCAGATTCAGAACATCACTGCTCAGCTTAGCAAGTACGGCAAGATCGAGGGCAAGAATGTCTTTTACTGGTTCCAAAACCACAAAGCCCGCGAAAGACAGAAGCTCAAACGCAACCCTATCACTACTACTACTTCCTCTACCACCACTTCCATTCCTTTAATTTTAGACACAAGGGGCCAAGAAGTAGAAGGAGAGGAAGATAGCCCGTTGAGGAAGAAGTGTAAGAGCTTGGCATCATTTGAGTGTTTTCAATTACAAGAAAGCAGATTGTTACGTAGAGACGAGGAATATAAAACTCTGGAGCTTTTTCCATTGCACCCGGAAGGCAGATGA | 708 | 0.459 | MILKESSMMGSMKVQHNLVRGLMWEQEPSLTLGLKRLRPLAPKLPNNNTNHSHSLSSLDLNFFIRPESGPRKLPSSPHNLHLHQHSPSPPQVEAQPGGTRWNPTQEQIGILEMLYRGGMRTPNAEQIQNITAQLSKYGKIEGKNVFYWFQNHKARERQKLKRNPITTTTSSTTTSIPLILDTRGQEVEGEEDSPLRKKCKSLASFECFQLQESRLLRRDEEYKTLELFPLHPEGR | 235 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi05g0970 | 235 | MobiDBLite | consensus disorder prediction | 69 | 103 | - | - | |
| Mibi05g0970 | 235 | SUPERFAMILY | Homeodomain-like | 92 | 164 | IPR009057 | - | |
| Mibi05g0970 | 235 | CDD | homeodomain | 99 | 159 | IPR001356 | GO:0003677 | |
| Mibi05g0970 | 235 | Gene3D | - | 100 | 164 | - | - | |
| Mibi05g0970 | 235 | SMART | HOX_1 | 96 | 163 | IPR001356 | GO:0003677 | |
| Mibi05g0970 | 235 | ProSiteProfiles | 'Homeobox' domain profile. | 94 | 159 | IPR001356 | GO:0003677 | |
| Mibi05g0970 | 235 | FunFam | WUSCHEL-related homeobox 4 | 98 | 165 | - | - | |
| Mibi05g0970 | 235 | Pfam | Homeodomain | 99 | 158 | IPR001356 | GO:0003677 | |
| Mibi05g0970 | 235 | MobiDBLite | consensus disorder prediction | 79 | 103 | - | - | |
| Mibi05g0970 | 235 | PANTHER | WUSCHEL-RELATED HOMEOBOX 4 | 12 | 235 | IPR044186 | GO:0003700|GO:0010067|GO:0010087|GO:0051301 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi05g0970 | Mibi-ChrMibi05 | 12101229 | 12102324 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi05g0970 | 12 | 176 | Wox Gene Family | AT1G46480 | 55.000 | 1.06e-53 | 169 |
Transcription factors information