Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0967 ATGAGCACCCTATCACTCTGTTACGCAACAGACCCCACCCCTTCGCTTTTCCTTCGCAATCTCAGCTCACAGAAAAGCCTCCATCCCTGCCCATCCCTCTCCTTCAATTTCAGAAATGCAGTGTCACTCGCAATCTCATCAAAATCCCCACTTCAGAATTTGCCTTCACGTCGATGTATTACCAGAGCCTGCTCCGCGTCAACCTCCGAAATCGACATGGTTAAGAATAAAGAAGGTATTTATGCCCCAAAACAGCAAAAAGTCGTAGTCTTGTGGGACCTCGATAACAAACCCCCTCGTGGACCTCCGTATCAGGCTGCCATGGCACTCAAACAGGTTGCACAGCGCTTCGGTGACATCATCGACATGTCAGCCTACGCCAATCGCCACGCATTTATCCACTTACCCCAATGGGTTCTCCACGAACGCCGTGAACGGAAGCAAATGGATTTCATGGAGCGTAAAGGAGTGATTTTGCCTTCTGATCCGTACGTTTGTGGGGTTTGCGGCCGCAAGTGTAAAACTAATCTCGACCTCAAGAAGCATTTCAAGCAGCTCCATGAGAGAGAGCGTCAGAAGAAGCTGAATCGGATGAGGTCACTGAAGGGGAAAAAGCGTCAGCGTTATAAAGAGAGGTTCATTTCTGGGAATGATAAATACAATGAGGCAGCAAGGTCTTTGATTACCCCTAAGGTTGGATATGGGTTAGCTTCTGAACTGAGGCGTGCTGGGGTGTTTGTGAAGACAGTAGAAGATAAACCGCAAGCAGCTGATTGGGCATTGAAGAGGCAGATGCAACATTCGATGAGCCGAGGGGTAGATTGGTTGTTTTTGGTGTCTGATGATTCAGATTTTTCGGAGATGTTGAGGAGGGCGAGAGAGGCGAATTTGGGAACGGTTGTTGTGGGTGACTGGGACAGGGCGTTAGGGAGGCATGCTGACTTATGGGTTCCTTGGATTGGAGTTGAGAATGGAGAGCTTGCAGAGGTAGATTTGGTGCCCAAGAACAGAAAAAGAGGGTCTTCTGCTGAAGATGATGGTTTATTTTCAATATCGCATCATGATAGAGATACTGTTATTACTAGCGAGTTGGATGGGATAGTAGATGAGCTTGTTGCAATGAGAACCGAGTTTAATGATCTGAGAAATTCAACATTTGAGGATGAGGATGAGGATCAAGGGTGGGTTTCGGAAGAACTGGATGAAAACTATATGTTAGTGATTGATGAGGATGAGGATGATGAAACAGAAAATGGGTTTTATTGA 1266 0.4668 MSTLSLCYATDPTPSLFLRNLSSQKSLHPCPSLSFNFRNAVSLAISSKSPLQNLPSRRCITRACSASTSEIDMVKNKEGIYAPKQQKVVVLWDLDNKPPRGPPYQAAMALKQVAQRFGDIIDMSAYANRHAFIHLPQWVLHERRERKQMDFMERKGVILPSDPYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKKRQRYKERFISGNDKYNEAARSLITPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMQHSMSRGVDWLFLVSDDSDFSEMLRRAREANLGTVVVGDWDRALGRHADLWVPWIGVENGELAEVDLVPKNRKRGSSAEDDGLFSISHHDRDTVITSELDGIVDELVAMRTEFNDLRNSTFEDEDEDQGWVSEELDENYMLVIDEDEDDETENGFY 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0967 421 Coils Coil 184 204 - -
Mibi05g0967 421 Gene3D - 81 319 - -
Mibi05g0967 421 ProSiteProfiles Zinc finger C2H2 type domain profile. 164 192 IPR013087 -
Mibi05g0967 421 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 46 415 - -
Mibi05g0967 421 ProSitePatterns Zinc finger C2H2 type domain signature. 166 187 IPR013087 -
Mibi05g0967 421 CDD PIN_LabA-like 174 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0967 Mibi-ChrMibi05 12072322 12073587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0967 15 401 C2H2 Transcription Factor Family AT5G52010 62.687 1.87e-173 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi05g0967 None None None