Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0936 ATGGCGTTTGTAGCTACTTCTTCTATGTTGTTAATCCTTTTCATTACAGCTCTGCTTTTTCAGTATTCATCTTCATCCTTCCGCACTGCTTTCTTCCTATCAGTGGAGAATCCAGAAGACGTTATAAAATCAGGTAACGAAATGTTTACTGCTGGGTTTTATAACGTTGGCGAGAATGCCTTCACCTTTGCCATTTGGTTCACTGAACCAGACGGCAAAAACTTGACCGTCATTTGGATGGCAAATCGTGATGAACCAGTCAACGGGATTGGCTCAACAATTGCCCTTCGTGACTATGGTAATCTTGTGTTGAGTGATGCAGGTCACTTTAATGTTTGGGCCACCAATACCACTTCCACCACCACTTCTCCAAAATTGGTTCTCAATGATAATGGCAATCTTGTTCTAACTGAATCTAACGGTAAACTACTGTGGCAAAGTTTTGATTTTCCAACCGATACACTTGTCCCCGAACAACCTCTCACCAGATACACAAAGCTTGTCTCCTCGACAACTCAAACTAACTTTTCCTCTGGTTTTTATAAGTTGTTTTTCGATAATGATAATCTTCTTCGTCTTCTCTATGATGGACTTGATGTTTCAAGTATCTACTGGCCAGATCCATGGCTCAACAGTTGGGATGCTGGCAGGTCTGCGTACAATGCAAGTCGCATTGCAATCCTCAATTCATATGGTAATTTTAGCTCAACTGACGACTTTATTTTCAAGACATCAGATTACGGCCCTGTGCTTCAGAGAAGATTAACTCTTGATTCTGATGGTAATCTTCGAGCCTACGGTCGAAAAAGCAGGGGAGAGAAATGGAGTGTTTCATGGCAAGCCAAATCACAACCTTGCAAGATTCATGGAATCTGTGGAGCCAACAGTGTGTGTTCTAATGATCCTTCTTCTGGGAGAAAATGCTCATGTCTTCCAGGTTTCAAGGTCAACAATGCAAGTGACTGGTCTTTGGGGTGCGCGCCAAAATTCAATTTGTCTTGCAGCTCAACAGAATCTCGCTTTTTGCACATAAGCAATACCGAGTTTTATGGCTACGACAGTGGATACTATGAAAATTATACCTATAAACAATGCGAGAAAGCATGCCTGGAAATCTGTAGCTGCACGGGATTTCAATATTCTTGGAAAGACTATGCTGGCTCTTATACTTGTTACCTAAAGACACGTTGGCTCAACGGGTATATTTCCCCTGGTTTCAGTGGATCAGTTTACTTGAGACTACCTAAGTCTAGCTCCTATGCTACTTTAAAAGAATCTACCTTGAGGAATTGTGATCATGTTAGCTCCATAATGCTTGAAAGATTGTATGACTTAAGAACTGGCAGACTTTTAGTGAAGGTACTTCTCTGGTTAGTACTTGCAATTGGTTCCTTTGAAGCTGTGGGCATCTTTCTAGTTTGGTGTCTGTTAGTGAGGACGCGAGGAAAATCAAATAAAGATCAACACAACTATGTTCTTGCTGCCACTGGATTTAGAAACTATAGCTATTCTGAGTTAAAAGAGGCAACAAAAGGGTTCAGTGAAGAGATTGGCAGGGGAGCTGGAGGAATCGTATACAAGGGTGTTCTAAAGGATCAACGAGTTGCAGCAATCAAGAGACTCAACGAAGCTAGCCAAGGAGAAAGTGAATTTCTAGCTGAAGTAAACATTATTGGCAGACTTAATCACATGAACCTAATCGACATGTGGGGGTATTGTGCAGAAGGCAAGCACAGGTTGTTAGTGTATGAGTACATAGAGAATGGTTCATTGGCGGAAAATTTGGTGTCCAATAGCTCCTCACTTGATTGGAAAAAGCGTTACAACATTGCTTTGGGTACGGCTAGAGGTCTAGCATATCTGCATGAAGAATGCTTGGAGTGGATTCTGCACTGCGATATAAAGCCTCAAAACATACTTCTGGATTCAGATTATCAACCCAAGGTGGCAGATTTTGGGCTATCCAAACTGCTGAATAGAAACGACACAAACAATTCAGGCTTCTCAAGGATTAGAGGAACTAGAGGTTACATGGCACCTGAGTGGGTGTTCAATTTACCAATCACGTCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTGTTGGAGATGATAACTGGAAAAAGCTTGGTGGACTCACACATGGTTGATGGACAAGAGTCGCATCATGGGAGGCTGGTGACATGGGTGAGGGAGAAGAAGAATAAAGGAAAGGAAACGACGTCGTGGGTGGAACAAATCATTGATCATACGATTGAGGGGGACTGTGATATTCGAAAGATGGAGATTTTGGCCGGGCTGGCTTTGGATTGTGTTGAGGAAGACAGAGTTGCAAGACCAACAATGAGTCAGGTAGTGGAGATGCTTCAAGGTCATGAAACTGACTCTCAGTGA 2394 0.4231 MAFVATSSMLLILFITALLFQYSSSSFRTAFFLSVENPEDVIKSGNEMFTAGFYNVGENAFTFAIWFTEPDGKNLTVIWMANRDEPVNGIGSTIALRDYGNLVLSDAGHFNVWATNTTSTTTSPKLVLNDNGNLVLTESNGKLLWQSFDFPTDTLVPEQPLTRYTKLVSSTTQTNFSSGFYKLFFDNDNLLRLLYDGLDVSSIYWPDPWLNSWDAGRSAYNASRIAILNSYGNFSSTDDFIFKTSDYGPVLQRRLTLDSDGNLRAYGRKSRGEKWSVSWQAKSQPCKIHGICGANSVCSNDPSSGRKCSCLPGFKVNNASDWSLGCAPKFNLSCSSTESRFLHISNTEFYGYDSGYYENYTYKQCEKACLEICSCTGFQYSWKDYAGSYTCYLKTRWLNGYISPGFSGSVYLRLPKSSSYATLKESTLRNCDHVSSIMLERLYDLRTGRLLVKVLLWLVLAIGSFEAVGIFLVWCLLVRTRGKSNKDQHNYVLAATGFRNYSYSELKEATKGFSEEIGRGAGGIVYKGVLKDQRVAAIKRLNEASQGESEFLAEVNIIGRLNHMNLIDMWGYCAEGKHRLLVYEYIENGSLAENLVSNSSSLDWKKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKLLNRNDTNNSGFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKSLVDSHMVDGQESHHGRLVTWVREKKNKGKETTSWVEQIIDHTIEGDCDIRKMEILAGLALDCVEEDRVARPTMSQVVEMLQGHETDSQ 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0936 797 Gene3D Hepatocyte Growth Factor 341 408 - -
Mibi05g0936 797 SMART blect_4 33 151 IPR001480 -
Mibi05g0936 797 PANTHER OS07G0415500 PROTEIN 6 794 - -
Mibi05g0936 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 208 IPR036426 -
Mibi05g0936 797 Gene3D - 150 277 IPR036426 -
Mibi05g0936 797 FunFam S-receptor-like serine/threonine-protein kinase 480 585 - -
Mibi05g0936 797 ProSiteProfiles Protein kinase domain profile. 511 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0936 797 Gene3D Phosphorylase Kinase; domain 1 477 585 - -
Mibi05g0936 797 SMART serkin_6 511 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0936 797 Pfam Protein kinase domain 514 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0936 797 Pfam PAN-like domain 334 397 IPR003609 -
Mibi05g0936 797 FunFam Serine/threonine-protein kinase 586 797 - -
Mibi05g0936 797 CDD B_lectin 44 151 IPR001480 -
Mibi05g0936 797 Gene3D - 34 149 IPR036426 -
Mibi05g0936 797 ProSiteProfiles PAN/Apple domain profile. 334 415 IPR003609 -
Mibi05g0936 797 CDD PAN_AP_plant 330 415 - -
Mibi05g0936 797 CDD STKc_IRAK 517 791 - -
Mibi05g0936 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Mibi05g0936 797 Gene3D Transferase(Phosphotransferase) domain 1 586 797 - -
Mibi05g0936 797 ProSiteProfiles EGF-like domain profile. 282 320 IPR000742 -
Mibi05g0936 797 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Mibi05g0936 797 PIRSF SRK 1 797 IPR024171 GO:0004674
Mibi05g0936 797 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
Mibi05g0936 797 Pfam D-mannose binding lectin 76 164 IPR001480 -
Mibi05g0936 797 Pfam S-locus glycoprotein domain 249 317 IPR000858 GO:0048544
Mibi05g0936 797 SUPERFAMILY Protein kinase-like (PK-like) 487 790 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0936 Mibi-ChrMibi05 8758530 8760923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0936 501 789 Trihelix Transcription Factor Family AT5G38560 43.003 3.61e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi05g0936 Pkinase 1.3e-54 CL0016