Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0912 ATGGGAACTGAGAGTCCGGCCAATTACACCTACATGGGACGAAGTCTCAGCGAATTGAGTATCAACGATAATTCTTCCTCTGCTTTCAGCGATTGTAACAGTGATAGATCTGGCGAATTCCCTACTGCTTCTTCCCAGAGTCGCCGTCTTCTTATTGCCTGTGCTGCTGAGAATTCCGACGATTTTATTCTCCAGCTTGTCTCCGATCTCCATTCCACTTCTATCGACGAGCAAAAGCAAGCCGCCTTGGAGATCAGATTGCTCGCCAAGAATAAACCAGAAAATCGCCTGAAAATCGCCGGAGCCGGCGCAATTAAGCCGTTGATCTCGCTTATTTCTTCCCCTGACCTTCAGCTCCAAGAGTATGGCGTCACCGCGATTCTGAATCTTTCCTTATGTGACGAGAACAAAGAGCTTATAGCTTCATCGGGAGCGATCAAACCTCTGGTTCGAGCTCTTAGGGCAGGAACATCAACGGCTAGAGAAAACGCCGCTTGCGCTCTCCTTCGTCTATCGCAGATTGACGAGACTAAGATCGTGATCGGACGGTCAGGAGCCATTCCGGCGCTGGTGAATCTTCTAGAGAACGGAGGGTTCAGAGGGAAGAAAGACGCATCGACGGCGCTGTATTCTCTGTGTTCGGTGAAGGAGAACAAAATTAGAGCAATACAGGCGGGAATCATGAGGGCGCTGGTGGAATTGATGGCTGATTTTGGATCAAACATGGTGGACAAATCAGCATATGTATTGAGTGTGCTGATATCTGTGTCGGAGGCGAGGATGGCGTTAGTGGAAGAAGGGGGGATTCCGGTGCTGGTGGAAATAATAGAGGTAGGTTCACAGAGGCAAAAGGAAATCGCAGTGGTGATACTGTTGCAGATTTGCGAGGACAGTGTGGCTTGCCGTACAATGGTTGCTCGTGAAGGAGCCCTTCCTCCCTTGGTTGCATTGTCTCAGTCCGGTACCAATCGGGCCAAACAGAAGGCGGAGACACTTATAGAGCTTCTACGGCAACCAAGATCCGGCAACGTCGCTGCCCGTACATCGGAAGTGTCGGCATAG 1062 0.5038 MGTESPANYTYMGRSLSELSINDNSSSAFSDCNSDRSGEFPTASSQSRRLLIACAAENSDDFILQLVSDLHSTSIDEQKQAALEIRLLAKNKPENRLKIAGAGAIKPLISLISSPDLQLQEYGVTAILNLSLCDENKELIASSGAIKPLVRALRAGTSTARENAACALLRLSQIDETKIVIGRSGAIPALVNLLENGGFRGKKDASTALYSLCSVKENKIRAIQAGIMRALVELMADFGSNMVDKSAYVLSVLISVSEARMALVEEGGIPVLVEIIEVGSQRQKEIAVVILLQICEDSVACRTMVAREGALPPLVALSQSGTNRAKQKAETLIELLRQPRSGNVAARTSEVSA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0912 353 SUPERFAMILY ARM repeat 60 336 IPR016024 -
Mibi05g0912 353 Gene3D - 202 351 IPR011989 -
Mibi05g0912 353 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 103 145 IPR000225 GO:0005515
Mibi05g0912 353 Pfam Armadillo/beta-catenin-like repeat 134 172 IPR000225 GO:0005515
Mibi05g0912 353 Pfam Armadillo/beta-catenin-like repeat 176 214 IPR000225 GO:0005515
Mibi05g0912 353 Pfam Armadillo/beta-catenin-like repeat 93 131 IPR000225 GO:0005515
Mibi05g0912 353 FunFam RING-type E3 ubiquitin transferase 52 342 - -
Mibi05g0912 353 PANTHER U BOX DOMAIN-CONTAINING 64 337 - -
Mibi05g0912 353 SMART arm_5 256 296 IPR000225 GO:0005515
Mibi05g0912 353 SMART arm_5 215 255 IPR000225 GO:0005515
Mibi05g0912 353 SMART arm_5 174 214 IPR000225 GO:0005515
Mibi05g0912 353 SMART arm_5 92 132 IPR000225 GO:0005515
Mibi05g0912 353 SMART arm_5 298 338 IPR000225 GO:0005515
Mibi05g0912 353 SMART arm_5 133 173 IPR000225 GO:0005515
Mibi05g0912 353 Gene3D - 33 199 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0912 Mibi-ChrMibi05 8568038 8569543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0912 63 343 U-box Gene Family AT2G23140 51.246 4.00e-84 265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1722 08 33930665 33932673 Mibi05g0912 05 8568038 8569543 CCT