Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0904 ATGATAACTATGACCGAGGAGATTGCAAAGCGATTAGAAGAAAGAATCGTTGGGAAAATCAAAGAAGAAAATGAGATTCAATTTGAAAGAATCAATAAGTTGGTGCAAGACAATATGGCATTTGTAGGAAAATGCATGGCCTGTGAGAAAGCAGTTTATTTGGTTAAGTTAACTGCAGGTGATCGAGTGTACCACAAGGCTTGCTTCCGATGCCATCATTGTAAAGGAACCCTTAAGCTTAGCACTACAATTCATTCGATGGAGTTCTTTACTGCAAGCCACACTTCGACCAATTGTTCAAAAGAACCGGCAGCCTTGCTTCGAAGCACTTCGAACTACATTGCATATGAGGGCAAACTCTACTGCAAACATCACCATACCCAGCTGATCAAGGAAAAGGGCAATTTGAGCCAGCTTGAAGATGACTGCGACAAGAGTACTGTGCATGATAAAATTATTGATGAACAAGTTTCTGCCTTCACATAG 486 0.4074 MITMTEEIAKRLEERIVGKIKEENEIQFERINKLVQDNMAFVGKCMACEKAVYLVKLTAGDRVYHKACFRCHHCKGTLKLSTTIHSMEFFTASHTSTNCSKEPAALLRSTSNYIAYEGKLYCKHHHTQLIKEKGNLSQLEDDCDKSTVHDKIIDEQVSAFT 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0904 161 Gene3D Cysteine Rich Protein 42 138 - -
Mibi05g0904 161 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 109 139 - -
Mibi05g0904 161 ProSiteProfiles LIM domain profile. 43 132 IPR001781 -
Mibi05g0904 161 PANTHER OS06G0237300 PROTEIN 44 148 IPR045268 -
Mibi05g0904 161 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 43 69 - -
Mibi05g0904 161 SMART lim_4 44 125 IPR001781 -
Mibi05g0904 161 ProSitePatterns LIM zinc-binding domain signature. 45 78 IPR001781 -
Mibi05g0904 161 Pfam LIM domain 45 82 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0904 Mibi-ChrMibi05 8477700 8480242 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi05g0904 LIM 1.8e-07 CL0167