LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi05g0903	ATGGCTCCCAACGAGCAAGATCCTACCCTTCTCAGTCTACAATCTGCATGCTCCGATTTGAAAGCTCTCCTTCTAGCTTCCAAGAAACTTGAAGATAGCCTTGGAATTATGGACACAAGGTTCGATGGTATAGAATCAACTCTTTCCACAGCTTCTAGAAGTGTTGCCCCTTTACAGTCTTTGACCATGTCCACCAAAGCACTTGACACTAGAATCAATAGGGCTATTTCTCCTGCAATTGCACTCCTTGACAGATTTAAGTTCTACGAGTCTCTCCAACAGAAGCTTCTAGATCTTTCTTCCAAACTCTCCCAGGAGAAGACGCAGCAAAAACGTCTCCATAATCTTTTTGATTACTTGAATTGTGTTGATCAGCTTAATGAGGCTATTATTTCCATAAGCCAAGAGGGTGAACCTGTTATTCAGAGGCTTCAAGAGGTGGTTGAGTTTATAAGCCGAACAAAAGCGGCTGATCAATACAGGACACAAAGGTTAAGAGAGACTCTAATCACTCTCAAGACACTCTACGAAACAGAGGTCGATGCCATGAGGTTTGAAGGTTTACTTGACCAGGCTTTACTTCACATGCAAGATGAGTTCGAGACCATTTTACTGCAAATAAAGCATCAGAAAGTCGGAGATTTATCACACCAGCTGGCAGAATATGACACAGTCGTTGACTCTGACTTAGGGTCAGAGCTGGAAATTGAAGTGTTGAGACGAATTTCAGGTACTTTAGCTGCCAATGATTGCTTGGATATATGCATCGACATCTACGTCAAGGTGAGATATAGAAGGGCTGCCAAGGCATTAATGAAGCTAAACCCAGATTACTTGAGAACATATACTCCAGAAGGGATCGATGGAATGGAATGGGAGAGCTTAGAAATGGCAATAACCCTTTGGATCCAACACTTTGAAGTTGCTATTAAGAAAGTTCTCTTCTCTGAAAAGAAGCTCTGCCACGGAGTTTTGGGTGACATCATGGCTGGACTAGTATGGCCTGAATGTTACGCCAAAATAGCTGACAAAATATTGGCTGTCTTCTTTCGGTTCGGAGAAGGTGTGGCCAGAAGCAGTAAAGAGCCACAGAAGTTGTTCAAGCTGTTGGATATGTTTGAGACCTTAGAAAAACTCAAACCTGAATTCTCTGAAATTTTTGACGGTGAATCTGGGGTGGATTTCTGCACTCGCTTCAGAGAGCTAGAGAAGCTTATAATAGACGCGTCAAGCAAAGTGTTTTGGGAATTCGGGCTGCAAATAGAAGGGAACACAGATGGTATTCCACCTCCACAAGATGGTTCTGTTCCCAAACTAGTAAGGTATGCCATTAATTACCTGAAATACCTTGCCACCAAGAATTACAGAGAAGCCATGGGAAATGTGCTCGAAACTGAGCAGATATGGAAAGCTGGGATGTTATCAAAACCTAATAATGGCGAGGATTTACTAAAGGAAGCCATTTTCAACATCATGGACGCCCTTCAAAGAAACATAGAGTCTAAACGCTCTCGTTGCAGGGACAAAACTTTGGTCAATATATTTGCAATGAACACGTACTGGTACATATACATGAGGGCCAAAAACTCAGAGCTTGGTGAGCTATTGGGTGATCAGTATATGAAAAGGAAGTACAAATCAGTGGCAGAGGAATCGGCCTACATGTATCAGATGCAAGCATGGGGAGTTCTGGTAAGCATCTTGGATATGGAGGATGTGAGGACACAGGAGAAGGATGTCATTGGAGGTATAGTGACAGAAAAAATTGAAACTTTTCTGAAGTATGTGAATGATACTTGTCAGAAGAACAAAGAGAGTTACAACATACCGGATGAAGATTTGAGGGAACAAATAAAAGAAGCTAGCTTGAACCTTGTGGTAGAAGCTTACAGAGAGTTTTTGGATTCCTACTCAGGATTATTACAGAGGAAATCATATCCGAGTCCTGAGAGGTTGATGGGTTTGGTGGCTAAGGCTTTTCATGGCGATGTGATGTTGAAGCGACGACCTTTGTCAGATCGAATGGCCGGCCGGTTTGCTACGTCTTTAGAGGGAGGGATAAATGATTTTCAACGATCTAGATCAGATAGTAGTGATGCTTGA	2103	0.4242	MAPNEQDPTLLSLQSACSDLKALLLASKKLEDSLGIMDTRFDGIESTLSTASRSVAPLQSLTMSTKALDTRINRAISPAIALLDRFKFYESLQQKLLDLSSKLSQEKTQQKRLHNLFDYLNCVDQLNEAIISISQEGEPVIQRLQEVVEFISRTKAADQYRTQRLRETLITLKTLYETEVDAMRFEGLLDQALLHMQDEFETILLQIKHQKVGDLSHQLAEYDTVVDSDLGSELEIEVLRRISGTLAANDCLDICIDIYVKVRYRRAAKALMKLNPDYLRTYTPEGIDGMEWESLEMAITLWIQHFEVAIKKVLFSEKKLCHGVLGDIMAGLVWPECYAKIADKILAVFFRFGEGVARSSKEPQKLFKLLDMFETLEKLKPEFSEIFDGESGVDFCTRFRELEKLIIDASSKVFWEFGLQIEGNTDGIPPPQDGSVPKLVRYAINYLKYLATKNYREAMGNVLETEQIWKAGMLSKPNNGEDLLKEAIFNIMDALQRNIESKRSRCRDKTLVNIFAMNTYWYIYMRAKNSELGELLGDQYMKRKYKSVAEESAYMYQMQAWGVLVSILDMEDVRTQEKDVIGGIVTEKIETFLKYVNDTCQKNKESYNIPDEDLREQIKEASLNLVVEAYREFLDSYSGLLQRKSYPSPERLMGLVAKAFHGDVMLKRRPLSDRMAGRFATSLEGGINDFQRSRSDSSDA	700

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi05g0903	700	Pfam	Exo70 exocyst complex subunit	302	643	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Mibi05g0903	700	Gene3D	Exocyst complex component Exo70	160	669	-	-
	Mibi05g0903	700	Coils	Coil	89	109	-	-
	Mibi05g0903	700	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	87	653	IPR004140	GO:0000145\|GO:0006887
	Mibi05g0903	700	SUPERFAMILY	Cullin repeat-like	96	644	IPR016159	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi05g0903	Mibi-ChrMibi05	8474747	8476935	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi05g0903	7	648	EXO70 exocyst subunit family	AT4G31540	30.137	1.04e-79	266