Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0898 ATGGTGGCTAAGAAAGCCACGGACGTGTCAAACTTTGAGGATGAGGATGACCTCGACGAAGAACCCGGTGAAGTGGTCGAATCGATGCCTCCTCAAAAGGTTGGTGAAGAAAGGGAACTCAACTCTCACCTCAAGAAGAAGCTCCTCAAGCTTGGCCGTGGATGGGAGACCCCTGACTTCAATGACGAAGTAACCGTTCACTATGTGGGGACTTTGCTTAACGGGACGAAGTTCGATTCCACCAGAGATAGGGGCGAACCTGTTACATTGACAGTCGGTCAAGCTCAAGTGGCTGCTGGGTTAGATCACGGGATTATCACCATGAAAATGGGAGAGGTTGCATTATTCACATTTCCTGCTGAGTCAGCCATTGAAATTGGGAATTCCGAAAGCGTTCCGTCCAACTCAGTCGTCCGGTTTGAGGTTGAACTCATTTCCTGGATCAAAGTGGTAGATGTTTGCAAAGATGGTGGTATTATCAAGAAAATTATGGAGAAGGGAAACAGGAATGAGCGACCCAGTGATCTAGATGAAGTTCTAGTGAACTACCAGGTGACACTAATTGACGGAACAATTGTTGCAGAGACTTCAGAAGAGGGGTTTGAATTCCATGTGAAAGATGGCCATCTGTTTCCAGGATTATCCAAAGTAATTTTGACTATGGGGAGGGGCGAGAAGGCTAAGTTAATTGTTCAACCTCAGTATGCCTTTGGAGAGAAGGGAAGAGAAGCAGAAAGCAGGGTCCATTCAATCCTGCCAAATTCAGTGTTGCATGTCAATATTGAATTGGTGTCCTTCAAGCCTGTTATTAATGTTACCGGAGACACCAAAGTTCTAAAGAAGATACTGAGAGAAGGTGAAGGCTCCCTAACAGCCAATGAGGGTGCCATTGTTACAATTAGTTATGTAGCTAAGGTAGAAGATGGCACAATATTTGAGAAGAAAGGAATTGATGAAACAAAGCCCTTGGAATTCATAACTGATGAAGTCATTGTTGGTCTAGATCGAGCTGTGGCTACAATGAAGAAGGGTGAGAAGGCCATTGTAAGTATACATCCTGATTATGCATTTGGAAACGTTGAAGCAAAATTTGATTTGGCTACTGTACCCCCGGGGTCCAATGTAGTCTATGAAGTTGAGATGGGTGACTTTATTAAGGAGAAAGCACCATGGGAATTAAATAATGGCGAGAAAATTGAGGCAGCTGGGAAGAAGAAAGAAGAAGGAAATCTGTTATTTAAAAATGGCAAGTATCAGAGAGCAGGGAAAAAGTACGACAAGGCTGTTGATTATGTTAGTGAAGATGGATCCTTTGGGGATGATGAGCAAAAGCTTGCTAAGGCACTGAGAGTGTCATGCTGGTTGAATGGTGCAGCGTGTAGCCTCAAACTTTATAACTTTTCAGAAGCAATCAAGTTCTGCTCACAGGTGCTTGATATTGAGTTCCACAATGTGAAAGCATTGTACAGAAGAGCACAAGCATATATAGAAACTGGGGACTATATTTCGGCAGATGTAGACATAAAGCAAGCTCTTGAAGCAGATCCACAGAACAGGGAAGTAAAGTTGCTTCAGAGGAAATTGAAGCAACTTCAACTTGAGAGTGACAAAAGAGATGCAAAACTCTATGCAAATATGTTCACACTTAACGAGAAAGACTCGACTGTAGTAACAAAGAGATTGAAGGTTGAGAAAAGCATGGATGAAATGAAAGATGAAGAGAAGATGGGAATGGAAGCAGACAAAATGGCTGACAGTGCAGCTGTCCCTTAA 1773 0.4303 MVAKKATDVSNFEDEDDLDEEPGEVVESMPPQKVGEERELNSHLKKKLLKLGRGWETPDFNDEVTVHYVGTLLNGTKFDSTRDRGEPVTLTVGQAQVAAGLDHGIITMKMGEVALFTFPAESAIEIGNSESVPSNSVVRFEVELISWIKVVDVCKDGGIIKKIMEKGNRNERPSDLDEVLVNYQVTLIDGTIVAETSEEGFEFHVKDGHLFPGLSKVILTMGRGEKAKLIVQPQYAFGEKGREAESRVHSILPNSVLHVNIELVSFKPVINVTGDTKVLKKILREGEGSLTANEGAIVTISYVAKVEDGTIFEKKGIDETKPLEFITDEVIVGLDRAVATMKKGEKAIVSIHPDYAFGNVEAKFDLATVPPGSNVVYEVEMGDFIKEKAPWELNNGEKIEAAGKKKEEGNLLFKNGKYQRAGKKYDKAVDYVSEDGSFGDDEQKLAKALRVSCWLNGAACSLKLYNFSEAIKFCSQVLDIEFHNVKALYRRAQAYIETGDYISADVDIKQALEADPQNREVKLLQRKLKQLQLESDKRDAKLYANMFTLNEKDSTVVTKRLKVEKSMDEMKDEEKMGMEADKMADSAAVP 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0898 590 SUPERFAMILY FKBP-like 152 267 - -
Mibi05g0898 590 SUPERFAMILY FKBP-like 273 402 - -
Mibi05g0898 590 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 295 385 IPR001179 GO:0003755
Mibi05g0898 590 MobiDBLite consensus disorder prediction 1 37 - -
Mibi05g0898 590 PANTHER PEPTIDYLPROLYL ISOMERASE 149 268 - -
Mibi05g0898 590 MobiDBLite consensus disorder prediction 566 590 - -
Mibi05g0898 590 Gene3D - 269 386 IPR046357 GO:0003755
Mibi05g0898 590 Gene3D - 151 267 IPR046357 GO:0003755
Mibi05g0898 590 Gene3D Tetratricopeptide repeat domain 388 545 IPR011990 GO:0005515
Mibi05g0898 590 Gene3D - 32 150 IPR046357 GO:0003755
Mibi05g0898 590 Coils Coil 514 541 - -
Mibi05g0898 590 FunFam Peptidylprolyl isomerase 268 387 - -
Mibi05g0898 590 Pfam Tetratricopeptide repeat 466 528 - -
Mibi05g0898 590 ProSiteProfiles TPR repeat profile. 485 518 IPR019734 GO:0005515
Mibi05g0898 590 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 291 381 IPR001179 GO:0003755
Mibi05g0898 590 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 172 264 IPR001179 GO:0003755
Mibi05g0898 590 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 57 145 IPR001179 GO:0003755
Mibi05g0898 590 SUPERFAMILY FKBP-like 38 150 - -
Mibi05g0898 590 MobiDBLite consensus disorder prediction 566 581 - -
Mibi05g0898 590 FunFam Peptidylprolyl isomerase 390 545 - -
Mibi05g0898 590 SMART tpr_5 451 484 IPR019734 GO:0005515
Mibi05g0898 590 SMART tpr_5 485 518 IPR019734 GO:0005515
Mibi05g0898 590 SMART tpr_5 402 435 IPR019734 GO:0005515
Mibi05g0898 590 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 61 148 IPR001179 GO:0003755
Mibi05g0898 590 SUPERFAMILY TPR-like 400 531 IPR011990 GO:0005515
Mibi05g0898 590 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 176 267 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0898 Mibi-ChrMibi05 8379941 8384944 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0898 33 547 Calmodulin-binding Proteins AT3G25230 54.913 0.0 560