Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0881 ATGGGAAGAGCTCCTTGCTGCGACAAGGCGAACGTGAAGAGAGGGCCCTGGTCTCCTGAAGAAGATGACAAGCTCAAGTCCTATATTGAACGCCATGGCACCGGTGGCAACTGGATCGCTTTGCCTCAAAAGATTGGGCTGAAGAGATGTGGTAAGAGTTGCCGTCTAAGGTGGCTGAACTACCTCCGCCCCAACATCAAGCATGGTGGTTTCTCTGAAGAAGAAGACAGCATCATATGCAGCCTCTACGTTAGCATTGGAAGCAGGTGGTCGGTGATTGCTGCTCAATTGCCAGGAAGAACAGATAATGATATAAAGAACTACTGGAACACAAAGTTGAAGAAGAAGCTTTTGGGGAAGCACCGTAAAGACCATCAAGGACGAAGTTGTAGGGGCAAGAGTAAGCAGGGCCAGGGAGTAGTGAACAATAAGGGAATCCTCGGGAATTCATCCATCATCCTTCCAGAAAATAGTGCCACTGGTCAGGTTCTTCAGGCTCATCATCAACAACACCTGTATTGGCCTCACCCTCACATGATGATGCCATACTCGTCATCATCAGATCAAGTAGTCCAAGGTTTCAACGACCAAGATTCCATTAGAAAACTTCTTATCAAGCTTGGAGGAACCTTTTCTAATTACCAGCCTCATCATGATGGCTTCAATTTTCAATTACCAGATGCTTCTACTACTTATCCCTCCCCACAATCACCAGTTTATCAAGTTTCTTCTTCTTCTGCTTCTACTTCTGCTTCCGGCGGAAGTACTATGAACAATAACCAATTACAATTCCCTCAACTCCATGACTACTCTGGACTCAGTAACTTGGTGCAAGGTAGCAGCACTTTCATCCAAGCACATGCGGAAATGTGTCTGTCTTATCCATCTAATCTAGAAGGGCTGGATCAATACTTTATGAATCATTATGACAAGATAGACACTACGAGCTCGTGTGACACCAACAACGTAGTTTGTCCTCCTTTACTTCCCTCAGATGATTATGAATGTATTCCAGTTACATCTCAGGAATTTGCTTTTCAGGAGTTGAGGTATCCAGGCGCCCACTGCTAG 1071 0.4528 MGRAPCCDKANVKRGPWSPEEDDKLKSYIERHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDSIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTKLKKKLLGKHRKDHQGRSCRGKSKQGQGVVNNKGILGNSSIILPENSATGQVLQAHHQQHLYWPHPHMMMPYSSSSDQVVQGFNDQDSIRKLLIKLGGTFSNYQPHHDGFNFQLPDASTTYPSPQSPVYQVSSSSASTSASGGSTMNNNQLQFPQLHDYSGLSNLVQGSSTFIQAHAEMCLSYPSNLEGLDQYFMNHYDKIDTTSSCDTNNVVCPPLLPSDDYECIPVTSQEFAFQELRYPGAHC 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0881 356 FunFam Transcription factor RAX3 7 68 - -
Mibi05g0881 356 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mibi05g0881 356 CDD SANT 71 111 IPR001005 -
Mibi05g0881 356 CDD SANT 16 62 IPR001005 -
Mibi05g0881 356 SMART sant 67 115 IPR001005 -
Mibi05g0881 356 SMART sant 13 64 IPR001005 -
Mibi05g0881 356 FunFam Transcription factor MYB36 70 138 - -
Mibi05g0881 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Mibi05g0881 356 MobiDBLite consensus disorder prediction 120 142 - -
Mibi05g0881 356 MobiDBLite consensus disorder prediction 225 260 - -
Mibi05g0881 356 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mibi05g0881 356 Gene3D - 7 68 - -
Mibi05g0881 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Mibi05g0881 356 PANTHER OS09G0431300 PROTEIN 1 283 - -
Mibi05g0881 356 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mibi05g0881 356 Gene3D - 70 140 - -
Mibi05g0881 356 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mibi05g0881 356 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0881 Mibi-ChrMibi05 8214241 8215512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0881 1 206 MYB Transcription Factor Family AT3G49690 59.223 1.31e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi05g0881 Myb_DNA-binding 1.2e-14 CL0123