Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0878 ATGATCCTAGAACCAACCCCCTTCCTCCAGATTCCTCAAGACTTCGACTTTGACATGCCCTTTGACTTTTTCTCCTCCGACCACTTCCGCATGTTCGAGTTCAAGATCCGGCGGTGTCCACGTGGCGGCAGGTCCCACGACTGGACACGGTGTCCCTTCGCCCATCCCGGCGAAAAGGCCCGCCGTAGAGACCCCCGGAAAATCCCTTACTCCGCCACCCCTTGCCCTGACTTCCGCCACTCAACTTGTAAAAAAGGTGACTCCTGCGATTTCTCTCACGGCGTCTTCGAATGTTGGCTTCATCCTTCTCGTTATAGGACTCACCTCTGTAATGACTTAAATCATTGTCGCCGTCGTGTCTGTTTCTTCGCCCACTCGCTCGATCAGTTGCGTGTCCCCACGCGCCCCTCTCAGACCACCTCTTCTTCAATAGGTAACGTCCAGGTTGATCTGAACCGGGTGGCTTCTGGTGTTGGTTCTCCTCGCGGTTCGGTTCTCCGGCCCGGGTTTTCCGGTATGCAGAAGATTCCGACGTGGGCGAGAAATAATGAAACTGGGCCCGGTTCAGGGGGACTCTGTTGTGGTGGTTATGAAATAGAGGTTCCTTTGGAGAGGGTGGAATCAGGAAGAGACCTTAGAGCTAAAATATATGCTAAGCTCACCAATGAAACCTCGTACGGACGAAGCGGCTCGCATGTATCGGCTCCTGATTTTGGATGGGTCTCTGAGCTGGTGAAGTGA 741 0.5385 MILEPTPFLQIPQDFDFDMPFDFFSSDHFRMFEFKIRRCPRGGRSHDWTRCPFAHPGEKARRRDPRKIPYSATPCPDFRHSTCKKGDSCDFSHGVFECWLHPSRYRTHLCNDLNHCRRRVCFFAHSLDQLRVPTRPSQTTSSSIGNVQVDLNRVASGVGSPRGSVLRPGFSGMQKIPTWARNNETGPGSGGLCCGGYEIEVPLERVESGRDLRAKIYAKLTNETSYGRSGSHVSAPDFGWVSELVK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0878 246 Gene3D - 70 133 - -
Mibi05g0878 246 ProSiteProfiles Zinc finger C3H1-type profile. 69 96 IPR000571 GO:0046872
Mibi05g0878 246 PANTHER UNKEMPT FAMILY MEMBER 22 246 IPR045234 -
Mibi05g0878 246 SMART c3hfinal6 104 127 IPR000571 GO:0046872
Mibi05g0878 246 SMART c3hfinal6 69 95 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0878 Mibi-ChrMibi05 8170336 8171076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0878 18 164 C2H2 Transcription Factor Family AT5G12850 53.247 2.99e-49 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi05g0878 None None None