Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0868 ATGTGGATGGGAAATGCTCCAGGGGAGATGGCTGGCCAAAATTCAAGTATCATTAGTGAAAGCCCACAAAATCCAGCTCCCAACTCGTTCATCCAGTGCTATTCATTGAACCTCAACGACCAAACTCGTATCATAGATGGAATATCAATGCTTTCTGGTTCTGAAGTACACCTGATAAATCCTGGAACTGTTAATTTTAATGCATCTTTTTCATCGAAAGGAAAGAACGTTATTGAGTATGCCTCACAAGGAACTTCATGTCCTATAAATAACAGTGAGTTTCAAGATCAAACAGCTGGAGGAGGAACACCAGTTACCCCTGCTTCACTTGCTGGCATTCTTGCTGCTAGAATTGGTCTTCAAGAAAACTTAGAGAAATCACAAGTTTTATCTCCTCCATTCATCAATTCATTGGACTCACTGGGACCTTATATGTTAGACAATAATAATTGGTCATATGCTCCAAGCCACAACAATCATATGACTAACGGAATCTTGGATTCAAATGCATGGGCTTCATCATCAAATGCTACAAAATTGAGCAGCCTTGCTTATGGTTCATCTAATTTTAATAATGAACCTATTTTAAGCCTTTCAACATCTCCAACCACATGCCAGTTCTCTGAAGCGAGTTGTTCTGATCAAGTAGTTACCCGTTGCTTCAGTAAAACAAGTTCAGGCCTGGAACTTGCCTCTTACAGCAACAGGGAGCTTGCCGTGAGTTTGAACTCTGCTGGTGGAAGTGGTAGACATTTTCATTCTTCACAAGCAATGTTAGGATCAAGATATCTCACTGGAGTTCAAGAGATACTTGCTCAACTTGCAAGATTCTCACTTGAGAATCTTGAACAGATAAGATGCTCACAAGCAAGTTCTATGTTCAAATTCAACATGGAAGCTCCATTGCATAGACAAGCAGATGAATCAAACAAATCCCAGCTTCTGACACTCTTAGAACTGGTGGACAACCGATATAATCAGTGTTTGGATGAGATTCATACTGTTGTTTCTGCATTCCATGCTGCTACAGAGTTGGACCCACGAGTTCATGCGCATTTTGCTCTTCAAACAATCTCTCTCTCATACAAGAACTTGCGAGACAGGATTAGCAATCACATTCTTGCCATGGGGCCTGATTTTGACAGTTTATGCACAGTGGACAAGGAAGGACCTATTGATCCTTCACTCATACATAAGCAATTGTCTCTCCAACAGTTGAAACGAAAAGATCATCAATTATGGAGGCCCCAACGGGGTTTGCCAGAAAACTCTGTCTCTGTCTTGCGAGCCTGGATGTTTCAGAACTTTCTCCATCCGTATCCTAAAGATTCAGAGAAGCATTTACTTGCATTAAGAACTGGGTTGACGAGAAGCCAGGTATCTAATTGGTTTATAAATGCTCGTGTTCGGCTATGGAAGCCGATGATTGAGGAAATGTATGCTGAACTGGATCGTAAAAGAAAGGCTAGTCGAAATGAAGGAGAAGGAGCAGAGAGTAGCTATGGAAAGCTTGGGCGGTAA 1521 0.4142 MWMGNAPGEMAGQNSSIISESPQNPAPNSFIQCYSLNLNDQTRIIDGISMLSGSEVHLINPGTVNFNASFSSKGKNVIEYASQGTSCPINNSEFQDQTAGGGTPVTPASLAGILAARIGLQENLEKSQVLSPPFINSLDSLGPYMLDNNNWSYAPSHNNHMTNGILDSNAWASSSNATKLSSLAYGSSNFNNEPILSLSTSPTTCQFSEASCSDQVVTRCFSKTSSGLELASYSNRELAVSLNSAGGSGRHFHSSQAMLGSRYLTGVQEILAQLARFSLENLEQIRCSQASSMFKFNMEAPLHRQADESNKSQLLTLLELVDNRYNQCLDEIHTVVSAFHAATELDPRVHAHFALQTISLSYKNLRDRISNHILAMGPDFDSLCTVDKEGPIDPSLIHKQLSLQQLKRKDHQLWRPQRGLPENSVSVLRAWMFQNFLHPYPKDSEKHLLALRTGLTRSQVSNWFINARVRLWKPMIEEMYAELDRKRKASRNEGEGAESSYGKLGR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0868 506 Pfam Homeobox KN domain 431 470 IPR008422 GO:0003677|GO:0006355
Mibi05g0868 506 Gene3D - 417 494 - -
Mibi05g0868 506 SUPERFAMILY Homeodomain-like 415 482 IPR009057 -
Mibi05g0868 506 SMART HOX_1 414 478 IPR001356 GO:0003677
Mibi05g0868 506 Pfam Associated with HOX 259 370 IPR006563 -
Mibi05g0868 506 MobiDBLite consensus disorder prediction 1 23 - -
Mibi05g0868 506 MobiDBLite consensus disorder prediction 485 506 - -
Mibi05g0868 506 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 174 493 - -
Mibi05g0868 506 CDD homeodomain 414 475 IPR001356 GO:0003677
Mibi05g0868 506 ProSiteProfiles 'Homeobox' domain profile. 411 474 IPR001356 GO:0003677
Mibi05g0868 506 SMART prehox3 252 371 IPR006563 -
Mibi05g0868 506 MobiDBLite consensus disorder prediction 9 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0868 Mibi-ChrMibi05 8097438 8099263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0868 191 487 Homeobox Transcription Factor Family AT4G32980 50.316 3.72e-95 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mibi05g0868 POX 2.6e-22 No_clan