Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0860 ATGAAGCATCTACTGAGGAAACTTCATATCGGTGGTGGTGGTATAAATGATCACCAGAGATTATCGCCTGAGACTCGTCCTGTGCTAAGTCCAACTCCTAATCTTACTTTATCTCCTTCTCCTTTGTCGTCCCCTACTACTACAATGCCTACCGTCACTGCAACTGAATCGGTCGCTGATCGGACGGCCGATGATGCTGTTTCAGATAAGGGAGTGGATTTTGGTCTTTTGGAGGAAGAGTTTCAGATGCAGTTGGCTATGGCGATTAGTGCTTCTGATTCTGATGTTCGTAAGGACCCCGATTCTGCTCAGATCGATGCTGCCAAGCAGATGAGCCTAGGGTGTGAAACCTCTGTTACTGACACTGAAGCCATCGTTCAGTTTCAATCCCTTCGTTATTGGAACTATAGTGTCATTGACTACGAAGAGAAAGTGATGGATGGATTTTATGATGTTTATGGCATCACCTCAAATTTAGTTGAACGAGGAAGGATGCCATTGTTGGTTGATCTGCAAACTACATCCACCTCAGAAAATCTTGATTATGAAGTGATTTTGGTGAACCGCAAGGTTGATACTGAGCTGAAGCAGCTTGAGAAAAAAGCCTATAAAGTATCCAAGAACTCCCAATTTCCTGAACAGGGACTAATCTTGAGTGGCCTACTACAGAAACTTGCTGACATTGTCGTTAATAGAATGGGCGGGCCAGTTGGTGATGCTGATGGAATTTTGAAAAGGTGGACCATGAGGAGCCGTGAGTTAAGAAATTCCTTAAGAACCATAATTCTTCCAATTGGCTGTCTTGATGTTGGACTTTCACGCCATCGTGCCCTTCTTTTCAAGGTACTTGCAGATAGAATGAATGTTCCCTGTATGCTGGTCAAAGGGAGTTATTACACTGGAACTGATGATGGAGCTGTGAATTTGATCAAAGCTGATGATGGAAGTGAATTCATTATTGATCTGATGGGTGCTCCTGGTGCTCTTATTCCTGCCGAAGTACCCAGCAGTCAGCTCAAAAACTACAGTTTACCTTTAAGGGGCTGTGCAGATATTGTGGAGGTACCAAAAAACACACATTTGATGTTAGATGATGGAAGTAGAATGCTGGCAGTTTCATCTGATCTTGGAAGATGTTCAACAGTAGGCAACACTTGGCCAGAAGAATTAATAAATGTTGGCAGTAAAAAAGGTCCAGTTGAAAGGAATTCTGTTGGATTAGATCAAATAGAGAGATTTGAACATGAATTTGGAAATCATCTTCAGTCAGTGCACAAATCAGGTGAAAGCTCTTCACATGCAAAAGCATCACCTGCAGAAAAAAAACAAGTGAAAGATGTTTCAAAAGGCGCAGGTTTCTCTAAAAATTTACCCATTGTCCAATTAGAAAATTGTGCACTACCTTTGTCTGATCTCTTTTCACATATAAATATACAAAATACAGATCAAGATAAAGCATTTGAAGATTTTCCTCAGGCTAGTGAAAAAATTGTTGAAACTTCTGTTCAAGCTGTTCCGGATAACTTGTTACCAAGCTGTGAAAAGTCTGTCAAATCAACTCAAGGGGTATCCTCTGCAAGTGATACTACGTGGAAGGTGTCTGCTTCTTTTTGTAATGGAATTGAAGAATCGGAGCACCTTGAAGCTTTAAATGCAGATAGTGCTCCTTCCAATCCTCATCAGAAGCACAAAGAGCAATTTCTTGAGTCATCCTTGCCTAAAGTAGCTGTGTCTTGCAAAAGACAAAGTGGGGTTAACTTTGTTTATGACGACGATGATGATGAAAATCTTCTTAATGATAAGGCTGGGGGGGTTTTTAATAACACTGAATTGGATAAGGATGCTACTGTTCAATTAAATGAAACAGCTAATGAAGATCACTCTAAATGTGATGGTAAAAGTGAGAAAGTTCATGCAGTTCTAGGGGAGGGCACAGAATGGGAGATTCAATGGGAGGATCTTCAAATTGGTGAGCGAATTGGCATTGGTTCTTACGGTGAGGTCTATCATGCTGACTTGAAAGGCACTGAAGTTGCTGTGAAGAAGTTTCTAGACCAAGATTTCTCTGGTGATGCATTGGCTCAGTTTAAATCTGAAGTTGAGATCATGCTGAGACTGCGGCATCCTAATGTTGTGCTCTTCATGGGAGCAATTACTCGCCCCCCACATTCCTCCATCTTGACAGAGTTTCTTCCTAGAGGAAGTTTATATAGGCTATTACATCGACCCAATTTTAGACTTGAAGAGAAGAGGCGGTTGCGCATGGCTTTTGATGTGGCTAAGGGAATGAATTACTTGCACACGAGCCATCCTCCCATTGTCCATCGAGATTTAAAGTCTCCAAATCTTCTTGTTGACAAACATTGGGTTGTTAAGGTCTGTGATTTTGGCTTGTCACGCATGAAGCACCATACCTTTTTGTCTTCAAAGTCTACTGCTGGAACGCCTGAGTGGATGGCTCCAGAAGTCTTAAGAAATGAGCCAGCCAATGAGAAGTGTGACGTATATAGTTTTGGTGTGATTTTGTGGGAGTTGGCTACCACAAAGATCCCATGGAAAGGGTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGGTTTCAAAATAGACGTCTTGAGATTCCAGAAGATGTTGATCCAGTGGTAGCACAAATTATACGTGATTGTTGGCAAATGGAGCCACACTTGCGACCGTCATTCTCACAGATCATGTCTCGTCTCCGCTCCCTTCGGCGTCTGGTTGTTAGAACAACTGATCCAACTGAAAAATCAAATGAAGTTGTCGATAGTAGAGAGCCGTTAAGATGA 2805 0.42 MKHLLRKLHIGGGGINDHQRLSPETRPVLSPTPNLTLSPSPLSSPTTTMPTVTATESVADRTADDAVSDKGVDFGLLEEEFQMQLAMAISASDSDVRKDPDSAQIDAAKQMSLGCETSVTDTEAIVQFQSLRYWNYSVIDYEEKVMDGFYDVYGITSNLVERGRMPLLVDLQTTSTSENLDYEVILVNRKVDTELKQLEKKAYKVSKNSQFPEQGLILSGLLQKLADIVVNRMGGPVGDADGILKRWTMRSRELRNSLRTIILPIGCLDVGLSRHRALLFKVLADRMNVPCMLVKGSYYTGTDDGAVNLIKADDGSEFIIDLMGAPGALIPAEVPSSQLKNYSLPLRGCADIVEVPKNTHLMLDDGSRMLAVSSDLGRCSTVGNTWPEELINVGSKKGPVERNSVGLDQIERFEHEFGNHLQSVHKSGESSSHAKASPAEKKQVKDVSKGAGFSKNLPIVQLENCALPLSDLFSHINIQNTDQDKAFEDFPQASEKIVETSVQAVPDNLLPSCEKSVKSTQGVSSASDTTWKVSASFCNGIEESEHLEALNADSAPSNPHQKHKEQFLESSLPKVAVSCKRQSGVNFVYDDDDDENLLNDKAGGVFNNTELDKDATVQLNETANEDHSKCDGKSEKVHAVLGEGTEWEIQWEDLQIGERIGIGSYGEVYHADLKGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRPPHSSILTEFLPRGSLYRLLHRPNFRLEEKRRLRMAFDVAKGMNYLHTSHPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATTKIPWKGLNPMQVVGAVGFQNRRLEIPEDVDPVVAQIIRDCWQMEPHLRPSFSQIMSRLRSLRRLVVRTTDPTEKSNEVVDSREPLR 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0860 934 Gene3D Phosphorylase Kinase; domain 1 647 731 - -
Mibi05g0860 934 PRINTS Tyrosine kinase catalytic domain signature 814 824 IPR001245 GO:0004672|GO:0006468
Mibi05g0860 934 PRINTS Tyrosine kinase catalytic domain signature 833 855 IPR001245 GO:0004672|GO:0006468
Mibi05g0860 934 PRINTS Tyrosine kinase catalytic domain signature 728 741 IPR001245 GO:0004672|GO:0006468
Mibi05g0860 934 PRINTS Tyrosine kinase catalytic domain signature 767 785 IPR001245 GO:0004672|GO:0006468
Mibi05g0860 934 PRINTS Tyrosine kinase catalytic domain signature 877 899 IPR001245 GO:0004672|GO:0006468
Mibi05g0860 934 FunFam Serine/threonine-protein kinase isoform 1 645 732 - -
Mibi05g0860 934 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 95 916 - -
Mibi05g0860 934 ProSiteProfiles Protein kinase domain profile. 654 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0860 934 MobiDBLite consensus disorder prediction 11 50 - -
Mibi05g0860 934 MobiDBLite consensus disorder prediction 23 50 - -
Mibi05g0860 934 SMART serkin_6 654 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0860 934 SUPERFAMILY Protein kinase-like (PK-like) 644 906 IPR011009 -
Mibi05g0860 934 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Mibi05g0860 934 Gene3D Transferase(Phosphotransferase) domain 1 733 917 - -
Mibi05g0860 934 Pfam Ethylene-responsive protein kinase Le-CTR1 127 330 - -
Mibi05g0860 934 CDD STKc_MAP3K-like 660 906 - -
Mibi05g0860 934 FunFam Serine/threonine-protein kinase CTR1 733 916 - -
Mibi05g0860 934 ProSitePatterns Protein kinases ATP-binding region signature. 660 682 IPR017441 GO:0005524
Mibi05g0860 934 MobiDBLite consensus disorder prediction 423 447 - -
Mibi05g0860 934 Pfam Protein tyrosine and serine/threonine kinase 654 906 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0860 Mibi-ChrMibi05 8061496 8070013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0860 1 923 MAP Kinase Kinase Kinase AT5G11850 54.127 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mibi05g0860 PK_Tyr_Ser-Thr 6.6e-65 CL0016