Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0840 ATGTCGACGGTGTACGTGTTAGAGCCGCCGACGAAAGGGAAGGTGGTTTTGAACACAACCCATGGCCCTCTCGACATTGAGCTTTGGCCCAAGGAAGCACCCAAAGCTGTCAGGAACTTCGTTCAGCTCTGCCTTGAAGATTACTACGTTAACACCATCTTCCATCGCATCATCAAGGACTTTCTTATCCAGGGTGGCGATCCCACTGGCACCGGCACAGGGGGTGAAAGTATTTATGGAGGTGTATTCTCTGATGAATTTCATTCACGTTTGAGATTTAAGCATAGAGGATTAGTTGCCATGGCAAATTCGGGGTCACTGAACTCCAATGGGAGTCAGTTTTTCATAACACTGGATCGTTGCGATTGGCTTGATCGGAAGCATACAATTTTCGGGAAGGTGACGGGAGATACGTTGTACAATCTTTTGAGATTGGGTGAACTTGAAACTGATAAGAATGATCGCCCTCTAGATCCCCCAAAAATATTATCAATTGAGGTATTATGGAACCCGTTTGAGGATATTGTTCCAAGAACAAGCCAACCTCAGATCCAAGCTAGTACTGATACAGACAATAAAGACTCAAAGAAAAAAGCTGTAAAAAAACTGAACTTACTTTCATTTGGAGAAGAAGCTGAAGAAGAGGAAAAGGAGTTGGCATCTGTAAAACAAAAGATTAAGAGCAGTCATGATGTATTGAATGATCCTCGTCTTCTGAGGGAAGCAATTCCTGATAATGAACTGGGCTCATCTGGTGGTAAGTCGACAAAAGATGTGCAGTTATCTGTAAGGGATGCATTGAGCTCAAAGAAAGAAGAGTCTCAGAAAAAATCTGAAGATAATGATGCCAATTTTGATGACAGTGATGATGATAATGAGGCAGACTTTGATGCCAGAATGCGCAGTCAAATACTAAAAAAACGCCAAGAGTTAGGGGATTTGCCACCCAAGCCAAAGTTGCGAAATGGAAGCTCAAGTCCAAAGAACCACAATTCATCAGCGGTCAGGTCCAATGCTATTAGTGTTGATGATGATCAACCTAAGGTGGAAAAATTGTCCATGAAGAAAAAGGGAATAGGATCTGAAGCAAAAGCTGAACGAATGGCAAATGCAGATGCAGATTTACAGTTGTTCAATGAATCTGAGAAAACTAGACAGTTGCAAAAGCAGAAGAAACGCAGAGTCCAAGGACGTGAAGATGAGGTTCTTGCAAAACTGGAGAAATTTAAGAAGGCTCTATCGGATAAGGCCACACCCTCAAGTGATGGATCTGGAGATGTAAAAGAAGAGGACTTGTCGGACTGGAAAGGAGTTGGCTTAAAATTTGCTCCAGACTCCGGCAAGGATCGGATGTCACGCAACGAAGACCCTAACGACTATGTTGTGGTTGACCCCCTTTTGGAGAAGGGTAAAGAGAAGTTCAATAAGATGCAAGCCAAACAAAAGAGACGAGAGCGAGAGTGGGCTGGGAAATCCCTTACTTGA 1485 0.4323 MSTVYVLEPPTKGKVVLNTTHGPLDIELWPKEAPKAVRNFVQLCLEDYYVNTIFHRIIKDFLIQGGDPTGTGTGGESIYGGVFSDEFHSRLRFKHRGLVAMANSGSLNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTLYNLLRLGELETDKNDRPLDPPKILSIEVLWNPFEDIVPRTSQPQIQASTDTDNKDSKKKAVKKLNLLSFGEEAEEEEKELASVKQKIKSSHDVLNDPRLLREAIPDNELGSSGGKSTKDVQLSVRDALSSKKEESQKKSEDNDANFDDSDDDNEADFDARMRSQILKKRQELGDLPPKPKLRNGSSSPKNHNSSAVRSNAISVDDDQPKVEKLSMKKKGIGSEAKAERMANADADLQLFNESEKTRQLQKQKKRRVQGREDEVLAKLEKFKKALSDKATPSSDGSGDVKEEDLSDWKGVGLKFAPDSGKDRMSRNEDPNDYVVVDPLLEKGKEKFNKMQAKQKRREREWAGKSLT 494
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0840 494 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Mibi05g0840 494 MobiDBLite consensus disorder prediction 294 315 - -
Mibi05g0840 494 Coils Coil 205 232 - -
Mibi05g0840 494 MobiDBLite consensus disorder prediction 322 340 - -
Mibi05g0840 494 MobiDBLite consensus disorder prediction 343 369 - -
Mibi05g0840 494 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Mibi05g0840 494 Gene3D - 2 182 IPR029000 -
Mibi05g0840 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Mibi05g0840 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Mibi05g0840 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Mibi05g0840 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Mibi05g0840 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Mibi05g0840 494 MobiDBLite consensus disorder prediction 438 458 - -
Mibi05g0840 494 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Mibi05g0840 494 CDD cyclophilin_CeCYP16-like 8 179 - -
Mibi05g0840 494 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
Mibi05g0840 494 MobiDBLite consensus disorder prediction 412 431 - -
Mibi05g0840 494 SUPERFAMILY Cyclophilin-like 14 179 IPR029000 -
Mibi05g0840 494 MobiDBLite consensus disorder prediction 265 283 - -
Mibi05g0840 494 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 217 IPR044666 -
Mibi05g0840 494 MobiDBLite consensus disorder prediction 471 494 - -
Mibi05g0840 494 MobiDBLite consensus disorder prediction 265 399 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi05g0840 Mibi-ChrMibi05 7874754 7878408 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0840 9 172 U-box Gene Family AT5G67530 49.390 2.25e-43 160